Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02165 ATGGAGGGGTTTTGGAGCATGTTTTGTGGGAAATCTGGTTGTGCAGAGACAGGAGGGAACCCTTGCAATTATGATTTTAAGTTTTTGAAAGATCCTTCCACATGTGTCAACCATTTGCTGTTTATTTGCATTAATGTGTTGCTGCTGATCATGATCTTATTTACAATCCTCAAGAAGTCATCACAGAAACCATCTCAAGGTCTAATCCAAGTGCAAAGTTATTCCAAATTGCAGCTAGTGTCTGCCATAGCCAATGGCTCTCTGGGGCTAATACATTTGTGCTCAGGCATTTGGCTTTTAGAGGAGAATCTGAGAAGAACACAAACAGCTTTGCCTCTTGATTGGTGGATGCTCGAAAGCATCCAGGGATTGACATGGTTGCTGGTGGGTTTTACAATAACTCTTCAGCTGAAACAATTTCCAAGAGCATGGTTATATATATTTTCTGTTGTAATCTTTATGGTTTCTGGTATTCTCTGTGCTTTGTCCTTGTTTTATGCAATTAGTACCAGAAAATTGTCCCTGAAAGTAGCTTTAGATGTTTTATCTTTTCCAGGGATAATTTTATTGGCACTATGCACTTACAAGGAATCTAAGTATAGAGACACTGAGAGAGAAAATAATGAAAGTCTATACACCCCTTTAAAAGAAGAGTCCAATAAAGTTGATTATGTTAGTTATGTCACACTATATGCAAAAGCTGGACTTTTCAGTAGGATGTCATTTTGGTGGATGAATCCATTAATGAAAAGGGGTGAAGAGAAAACACTTCAGGATGAGGACATACCAAAGTTGGGGGAGGCAGATCAAGCAGAAAGTTGTTATTTTCTGTTTCTAGACCAATTGAACAGACAGAAACAGAAAGAACCATCATCACAACCATCAATTTTGAAGACAATAATTATGTGCCACTGGAAGGAGATTTTGATATCAGGATTCTTTGCATTGCTAAAGGTAGTCACTCTCTCATCTGGCCCTTTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTCATGAGAGTTTCAAATATGAAGGTTATGTGTTGGCCATATCACTGGTCTTTACAAAGATCATAGAATCCTTGTCACAAAGGCAGTGGTACTTTCGCACCAGACTCATTGGTATTAAAGTTAGATCACTGCTCATTGCAGCAATTTATAAAAAGCAACTGAGGTTGTCCAATGCTGCAAGATTGGTGCACTCTGGTGGTGAGATAATGAACTATGTGAATGTGGATGCTAATAGAATTGGAGAGTTTCCCTACTGGTTTCACCAGACATGGACAACAAGCGTCCAACTGTGTATTGCATTAGTAGTGCTTTTCCGTGCTGTTGGGCTAGCAACATTTGCCTCATTGGCGGTGATAGTTCTAACTGTGCTTTGCAATACTCCACTTGCTAAGTTGCAGCATAAGTTTCAGAGAAAACTTATGGTGTCACAAGATGAGAGATTGAAGGCCACTTCTGAGGCTCTTGTGAGCATGAAGGTTTTGAAGTTATATGCATGGGAAACCAATTTCAGAAATGCAATTGAAAGGTTGAGGGATGTGGAACTCAAAAGGTTGTCTGCGGTGCAATTAAGAAGGTCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTCTCTGCTGCTTCCTTTGGGGCTTGCTACTTGCTTAATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCAACTTTACGCCTTGTTCAAGATCCTATTAGAACCATCCCTGATGTCATTGGAGTGGTCATTCAAGCAAAAGTTGCATTTGCAAGGATTGTTAAATTTCTTGACGCGCCTGAACTGCAGAGTGAAAATGCCAAGAAAAGGTGTTTTAGTGAAAATATGAGGGGCTCAATTTTGATAAATTCAACTGACTTTTCATGGGAAGGTAACATGTCAAAACCAACACTGAGAAACATAAACTTGGAGGTTGGACCAGGGCAAAAGGTGGCAATCTGTGGTGAAGTTGGCTCAGGAAAATCAACTCTCTTAGCAGCAATTCTCAGAGAAGTTCCTATTACTCGTGGAACTATTGAAGTTCATGGGAAGTTTgcctatgtttctcaaacagcatggatacagacaggtacaatacgggataatatattgtttggagcagctatggatgctgaaaaatatcaagaaacacttcataggtcttcactagtgaaggaccttgagttgtttccagatggtgatcttactgaaataggggagaggggggtcaacctgagtggcggtcagaagcagcgaattcaacttgctcgcgctctttatcagaatgctgatatatatctcttggatgatccatgcagtgctgttgatgcacacacTGCCACAAATTTGTTTAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTACTGGTGACTCATCAAGTTGATTTTCTTCCAGCCTTCGATTCTGTTTTGTTGATGTCTAATGGGGAAATCATACAAGCTGCTCCTTATCATCATCTGTTGAGCTCAAGCCAAGAATTTCAGGACCTTGTCAATGCTCACAAGGAAACTGCTGGTTCTAATAGGCTTGTGGATGTCTCTTCTTCCAAAGGAGACTCAAATACTGCCACAGAGATTAGTAAAATATACATGGACAAACAGTTTGAAACATCACAAGAAGGTCAATTAATTAAGAAGGAAGAGAAAGAGAAAGGAAACAAAGGGTTCAAACCTCACTTACAGTATCTGAATCAGGACAAAGGATATATATACTTCTATGTGGCTTCTCTTTCTCACCTTATATTTGTGATTGGCCAGATATTTCAGAACTTATGGATGGCTTCTAATGTTGACAATCCTTATGTCAGCACATTGCAATTGATTTTTGTGTACTTGTTGATAGGGTTTATTTCTGCATGTTTCTTGTTCATCAGAAGTCTTGTTGTAGTTTCTATGAGTATTCGATCATCAAAATCTTTATTTTTACAACTACTAAACTCCCTATTTCGTGCACCTATGTCATTTTATGACTCCACTCCTTTGGGAAGGATACTTAGTAGGGTCTCCTCAGATCTAAGCATTGTCGATCTTGATGTCCCATTTGGCCTTATTTTTGCTGTGGGAGCTACTACAACTTGTTATTCAAATCTTGCAGTTATAGCAGCCATCACTTGGCAAGTCTTGTTTATCTCTATACCAATGCTTTACATAGCATTTCGCTTGCAGAGATATTACTATGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAACCATCTTGCTGAATCTATTGCTGGAGTTGAGACAATAAGGGCTTTTGAGGAGGAGGATCGTTTTTTTGCAAAGAATCTTGATCTAATTGATGTCAATGCCAGTCCTTATTTTCATACCTATGCAGCAAATGAGTGGTTAATGCTAAGGTTAGAAACAATCAGTGCAGTGGTCTTTGCATCCGCTGCACTTTGCATGGTGGTACTTCCACCTGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCATTAAACTCTTCCCTAGTATTTTCAATTCAAAACCAATGCACTCTAGCAAATCAAATAATATCAGTAGAGAGGCTAAATCAATACATGCATATACCAAGTGAGGCCCCAGAAGTAATAGAGGGAAATCGTCCTCCTGTGAATTGGCCAGCTGAGGGAAAAGTAGAATTACATGATTTGGAGATAAGGTACCGGCCTGATGCGccactagtactacgtgggatcacatgcacatttgaaggagggcacaagattggtgttgttggcagaacaggcagtggaaaatccactcttataggtgccttattccgtctagtggagccagcaggtggaaaaataatagttgatggcatagacatttgttctattggacttcatgacttgaggtcacgctttggtatcatacctcaggatcctactcttttcaatggcacagtcagatacaatatggaccccttatctcagcactcagataaagagatatgggagGTTCTTAGGaagtgtcagttgagagaagttgttgaagagaaggaagaagggttggactcctcagttgttgaagctggggcaaattggagcatgggacaacgacaattgttctgcttggggcgttcccttttgaggagaagtcggatactagtgcttgatgaagcaactgcatcaattgataatgcaacagatttgattctacagaaaacaattaggacagagtttgcagattgtactgtaatcacggttgcccacagaataccaactgtgatggattgcactaaggttcttgccattcgtgaagGAGAATTGGTGGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCACTGTTTGGACAACTTGTCAAGGAATATTGGTCTCATTTGCAGTCTGCTGAATCACATTAA 4440 0.3182 MEGFWSMFCGKSGCAETGGNPCNYDFKFLKDPSTCVNHLLFICINVLLLIMILFTILKKSSQKPSQGLIQVQSYSKLQLVSAIANGSLGLIHLCSGIWLLEENLRRTQTALPLDWWMLESIQGLTWLLVGFTITLQLKQFPRAWLYIFSVVIFMVSGILCALSLFYAISTRKLSLKVALDVLSFPGIILLALCTYKESKYRDTERENNESLYTPLKEESNKVDYVSYVTLYAKAGLFSRMSFWWMNPLMKRGEEKTLQDEDIPKLGEADQAESCYFLFLDQLNRQKQKEPSSQPSILKTIIMCHWKEILISGFFALLKVVTLSSGPLLLNSFILVAEGHESFKYEGYVLAISLVFTKIIESLSQRQWYFRTRLIGIKVRSLLIAAIYKKQLRLSNAARLVHSGGEIMNYVNVDANRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVIVLTVLCNTPLAKLQHKFQRKLMVSQDERLKATSEALVSMKVLKLYAWETNFRNAIERLRDVELKRLSAVQLRRSYSNFLFWASPVLVSAASFGACYLLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLDAPELQSENAKKRCFSENMRGSILINSTDFSWEGNMSKPTLRNINLEVGPGQKVAICGEVGSGKSTLLAAILREVPITRGTIEVHGKFAYVSQTAWIQTGTIRDNILFGAAMDAEKYQETLHRSSLVKDLELFPDGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPCSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSNGEIIQAAPYHHLLSSSQEFQDLVNAHKETAGSNRLVDVSSSKGDSNTATEISKIYMDKQFETSQEGQLIKKEEKEKGNKGFKPHLQYLNQDKGYIYFYVASLSHLIFVIGQIFQNLWMASNVDNPYVSTLQLIFVYLLIGFISACFLFIRSLVVVSMSIRSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLIFAVGATTTCYSNLAVIAAITWQVLFISIPMLYIAFRLQRYYYATAKELMRMNGTTKSFVANHLAESIAGVETIRAFEEEDRFFAKNLDLIDVNASPYFHTYAANEWLMLRLETISAVVFASAALCMVVLPPGTFTSGFIGMALSYGLSLNSSLVFSIQNQCTLANQIISVERLNQYMHIPSEAPEVIEGNRPPVNWPAEGKVELHDLEIRYRPDAPLVLRGITCTFEGGHKIGVVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNMDPLSQHSDKEIWEVLRKCQLREVVEEKEEGLDSSVVEAGANWSMGQRQLFCLGRSLLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAIREGELVEYDEPMNLMKREGSLFGQLVKEYWSHLQSAESH 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02165 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g02165 1479 SMART AAA_5 651 824 IPR003593 -
Gma10g02165 1479 SMART AAA_5 1259 1443 IPR003593 -
Gma10g02165 1479 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1479 - -
Gma10g02165 1479 CDD ABC_6TM_ABCC_D2 915 1208 IPR044726 GO:0140359
Gma10g02165 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 927 1196 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g02165 1479 Gene3D - 1217 1468 IPR027417 -
Gma10g02165 1479 SUPERFAMILY ABC transporter transmembrane region 920 1213 IPR036640 GO:0005524|GO:0016021
Gma10g02165 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1479 - -
Gma10g02165 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1460 IPR027417 -
Gma10g02165 1479 CDD ABCC_MRP_domain1 624 824 - -
Gma10g02165 1479 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Gma10g02165 1479 Pfam ABC transporter 1250 1398 IPR003439 GO:0005524
Gma10g02165 1479 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Gma10g02165 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 847 IPR003439 GO:0005524
Gma10g02165 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 847 IPR027417 -
Gma10g02165 1479 CDD ABCC_MRP_domain2 1231 1451 - -
Gma10g02165 1479 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Gma10g02165 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1467 IPR003439 GO:0005524
Gma10g02165 1479 Pfam ABC transporter transmembrane region 919 1158 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g02165 1479 Pfam ABC transporter transmembrane region 308 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g02165 1479 SUPERFAMILY ABC transporter transmembrane region 297 604 IPR036640 GO:0005524|GO:0016021
Gma10g02165 1479 Gene3D ABC transporter type 1, transmembrane domain 881 1214 IPR036640 GO:0005524|GO:0016021
Gma10g02165 1479 Gene3D ABC transporter type 1, transmembrane domain 280 606 IPR036640 GO:0005524|GO:0016021
Gma10g02165 1479 Gene3D - 619 853 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02165 Gma-Chr10 49206867 49213858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02165 588 835 Calmodulin-binding Proteins AT2G36910 28.788 2.04e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02165 K05666 - gmx:100784336 2895.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02165 10 49206867 49213858 Gma10g02165 10 49206867 49213858 ECH
Gma10g02165 10 49206867 49213858 Gma20g01546 20 42485483 42491710 GST
Gma16g01510 16 34953825 34975870 Gma10g02165 10 49206867 49213858 PCT
Gma10g02165 10 49206867 49213858 Gma16g01510 16 34953825 34975870 PCT