Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02149 ATGCTCGGGGACTCAGCTGTGCTGGGAGCAGGAGGAGGAGGAGGTGGTGGCCGCGGAGGAGGAGTAGAAAGTGGTGCCTCCGCCGATGCAGTGGCGGCGACGGTGACCGTGACACATGATGTGGCGACGACAACCGGAGGAGGCGGTGGTGGATCAAATAATTCGGGGGACGATGAGAGGGGTAGAATCGAAGAAGGTGAACGTAGCTTCGGCGGTAACCGGTGGCCACGACAAGAGACTTTGGCCTTGTTAAGGATACGCTCCGATATGGACGTGGCGTTTCGAGATGCAAGTGTCAAGGGTCCCTTGTGGGAAGAAGTATCCAGGAAGATGGCAGAGCTTGGGTATCACAGAAGCTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAGGCCGAAGTGGGAAACAAGATGGCAAAACCTATCGTTTCTTTGATCAACTACAAGCCCTTGAGAACCACTCTCCAACACCCCATTCTCCCAACCCTTCACCAAAACCCCCACAATCAGCACCATCAAGAGTAGTAGCATCATCGgtgtcactaccaattgcaacaacaacaacagtgtcactaccaattccaacaccaacaacagtgCCAATGCAGCCTATATTGTCCAACAACGCTATACTCACTAGTAGTGTCCCCAATATCACTGTTCCATCAACAACACCACTCCCTATAACCATTCCTCAACCCATTCTCACCTCCCCATCAATAAACCTCACAATCCCTTCTTACCCTCCAACAAACCCTACCAATTTCCCACCACCACCAAACCCTACCCTACCATCCTCTTTCCCCACCGACACCTTCTCCAATTCCAGCTCCTCCTCCACCTCCTCCGAGGAAACATTGGAAGGGAGACGCAAGAGGAAGCGCAAGTGGAAAGATTTCTTCGAGAGACTAATGAAAGAAGTGATCGAGAAGCAAGAGGAGCTACAAAAGAAGTTCCTGGAAGCCATAGAGAAACGCGAGGACGACAGAATAGCAAGAGAAGAAGCATGGAGAGTACAAGAGATGAAAAGAATCAATAGGGAAAGAGAAATCTTAGCACAAGAAAGATCCATAGCCGCAGCCAAAGACGCAGCCGTTATGTCATTCCTTCAAAAAATAGCCGAACAACAAAACCTCGGTCAAGTATCGACCAACATCAACCTCGTACAACAACCACAACCTCAATTACAACCGCAGCCACCACTACAACAACAAGTGACACAACCTAGTATTGCAGCAGCACAACCTCCCGTACAACAGCCACCGCCCGTGGTTGTTACACAGCCCGTGGTGCTGCCAGTGGTGTCACAAGTGACGAATATGGAGATAGTGAAAGCCGATAATAATAGTAACAACAATAATAACGGCGAGAATTTCTTGGCACCAAGTTCTTCTCGGTGGCCAAAAGTGGAGGTTCAGGCATTGATAAAGCTTCGGACGAGCATGGATGAGAAGTATCAAGAGAATGGACCAAAGGGTCCTCTCTGGGAGGAGATCTCAGCCTCAATGAAGAAGCTCGGGTACAACCGAAACGCGAAAAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAAAGCAACAAGCGGAGACCGGAAGATTCCAAGACGTGCCCTTATTTCCACCAGCTGGACGCGCTGTACAGGCAGAAGCACAGGGGCGAAGAGAGCCCCGCGGCGGTGGAGGCGAAGCCGGAGAGCGCGGTGGCGCCGTTGATGGTGCAGCCGGAGCAGCAATGGCCACCTCAGCAGCAGCAGCAGGATAGGGACATCACAATGGAAGACATGGAGAACGAAGATGATGAATATGAAGAAGAGAGGGAAGGAGAGGAAGAATTAGAGGATGATGAAGATGAAGAGGATGAAGAAGGTGGTGGTGGTGGTGGGAACTATGAGATAGTGGCAAACAAAACAAGTGGTGGTGGTGGTGCTTCTGCTGCTTCAGTGGGGGCTTCAACGGAGTAG 2004 0.4895 MLGDSAVLGAGGGGGGGRGGGVESGASADAVAATVTVTHDVATTTGGGGGGSNNSGDDERGRIEEGERSFGGNRWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDQLQALENHSPTPHSPNPSPKPPQSAPSRVVASSVSLPIATTTTVSLPIPTPTTVPMQPILSNNAILTSSVPNITVPSTTPLPITIPQPILTSPSINLTIPSYPPTNPTNFPPPPNPTLPSSFPTDTFSNSSSSSTSSEETLEGRRKRKRKWKDFFERLMKEVIEKQEELQKKFLEAIEKREDDRIAREEAWRVQEMKRINREREILAQERSIAAAKDAAVMSFLQKIAEQQNLGQVSTNINLVQQPQPQLQPQPPLQQQVTQPSIAAAQPPVQQPPPVVVTQPVVLPVVSQVTNMEIVKADNNSNNNNNGENFLAPSSSRWPKVEVQALIKLRTSMDEKYQENGPKGPLWEEISASMKKLGYNRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYRQKHRGEESPAAVEAKPESAVAPLMVQPEQQWPPQQQQQDRDITMEDMENEDDEYEEEREGEEELEDDEDEEDEEGGGGGGNYEIVANKTSGGGGASAASVGASTE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02149 667 Coils Coil 306 333 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 275 292 - -
Gma10g02149 667 Gene3D - 75 136 - -
Gma10g02149 667 Gene3D - 475 536 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 584 667 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 1 74 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 160 186 - -
Gma10g02149 667 Pfam Myb/SANT-like DNA-binding domain 473 560 IPR044822 -
Gma10g02149 667 Pfam Myb/SANT-like DNA-binding domain 73 159 IPR044822 -
Gma10g02149 667 MobiDBLite consensus disorder prediction 258 274 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 37 52 - -
Gma10g02149 667 CDD GT1 73 138 - -
Gma10g02149 667 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 34 649 - -
Gma10g02149 667 SMART sant 71 133 IPR001005 -
Gma10g02149 667 SMART sant 471 533 IPR001005 -
Gma10g02149 667 MobiDBLite consensus disorder prediction 57 72 - -
Gma10g02149 667 PANTHER - 34 649 - -
Gma10g02149 667 ProSiteProfiles Myb-like domain profile. 473 531 IPR001005 -
Gma10g02149 667 Coils Coil 606 636 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 250 300 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 400 428 - -
Gma10g02149 667 CDD GT1 473 538 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 606 639 - -
Gma10g02149 667 MobiDBLite consensus disorder prediction 408 422 - -
Gma10g02149 667 ProSiteProfiles Myb-like domain profile. 73 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02149 Gma-Chr10 49002159 49004993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02149 64 593 Trihelix Transcription Factor Family AT1G76880 50.464 2.71e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma10g02149 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02149 - - gmx:100811604 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02149 10 49002159 49004993 Gma20g01565 20 42700743 42703665 GST
Gma16g01495 16 34356242 34359871 Gma10g02149 10 49002159 49004993 PCT
Gma02g00738 02 7161592 7165566 Gma10g02149 10 49002159 49004993 PCT
Gma10g02149 10 49002159 49004993 Gma16g01495 16 34356242 34359871 PCT
Gma10g02149 10 49002159 49004993 Gma02g00738 02 7161592 7165566 PCT