Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02148 ATGGAGCTTGGAGACACTACCACAGTGATGGAAACGTCGTCCGGTGAGGCTGTGGCGGCGCATGGCGGTGGCGAGGTGATTATGATGGATGCGAATTCCGGTGAAGAAGAGAATAATAATCATAATAATAAAGGAAAATTAGAAGAGGGTGGTGGAGAAGAAGAAGAAGGTGACAATAAGATCAACAACTCATGCGGTGGAAACAGATGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCCGATATGGATGTTGTGTTTCGAGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTGCAAGGAAACTATCAGAACTGGGTTACCACCGAAGCGCTAAGAAGTGCAAGGAGAAATTCGAGAATGTGTACAAGTACCACAAAAGAACCAAAGAGGGCAGAAGTGGGAAACACGAGGGAAAAACCTACAAATTTTTTGATCAATTACAAGCTCTTGAGAATCAATTCACAGTCTCTTCTTACTCGCCAAAACCACAACCCACTTTGGCAACAGCAACAACAACAACAAACACAATAACATTACCACCCCCAACCAGGCCAAGTGCCATAACACCAATCTCTTATGTCACCACCACTGTTCCGTCCACAAACCCTACAATCATATCTCCTTCACCACCACAACCACCAACCAATGCCACCACGACAACCACAATCACTTCTCCAACAGTAGTAACCAACCCTAGAAACCCTCCACAACCCAACAACAACAACAACAGCAATAACATCCCTTACTCTTTGCCCAACATGAACAACCTCTTCTCAACAACTTCAACTTCTTCTTCCACGGCCTCGGATGAGGACTTGGAAGAGAAGTACCGTAAGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACGAGGCAAGTCTTGGCCAAGCAAGAGGAAATGCAGAAGAGGTTCCTGGAAGCCATTGACAATAGGGAGAGAGAACAAGTGGCTCAACAAGAGGCTTGGAGGATCCAAGAAATGGCAAGGATCAATAGAGAACACGAACTTCTTGTCCAAGAAAGATCAACTGCCGCAGCCAAAAATGCTGCAGTTATTGCTTTTTTGCAACAGTTATCTGGTCAGCACCAAAATTCCACAACACAAGCCAATTTCCCTCAACAACCACCTCCACAAAAAGTTACAATAGTACAACCACCACCACAACAAGCTCCACAACCACAAGCTCCATTGGTGTTGTCAAATAGTGACAACATGGAGATTCAGAAAATGAATAAtggtcacagtgttgttactgctactgttactgctactgctactcctactcctactactactttcgttgctgctgctactgctattactactactccttcttcattgagttctttatcttcttctAGGTGGCCAAAGACAGAAGTTCATGCTTTGATAAGACTGAGGACAAGTCTTGAAACCAAGTACCAAGAAAATGGACCAAAGGCTCCATTGTGGGAGGATATATCAGCAGGAATGCTGAGGCTCGGGTACAACAGGAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGAGAGCAACAAGCAAAGGCGCGAGGATAGTAAGACATGTCCCTATTTTAATGAACTTGAAGCTTTATACAAAGAAAAGAGCAAGACTCAGAACCCCTTTGGCGCTTCGTTCCACAACATGAAGCCACATGAGATGATGGAGCCATTGATGGTGCAACCCGAGCAGCAATGGAGACCTCCCTCTCAGTACGAACAAGGTGCAGCGAAGGAGAACAATAATAATGAAAGAAAAGAAAGAGAGGAGGAGgaagaagatgaagaagaagaagaagaagaagaagaGGATGAAAATGAAGAGGGAGATCTAGAGAGTGTGGAAGATGAAGGAGGTAACCGTTATGAGATTGCGACAAATAAACTTTCTTCAGTGGACACCGTTGAATGA 1953 0.4117 MELGDTTTVMETSSGEAVAAHGGGEVIMMDANSGEEENNNHNNKGKLEEGGGEEEEGDNKINNSCGGNRWPRQETLALLKIRSDMDVVFRDSSLKGPLWEEVARKLSELGYHRSAKKCKEKFENVYKYHKRTKEGRSGKHEGKTYKFFDQLQALENQFTVSSYSPKPQPTLATATTTTNTITLPPPTRPSAITPISYVTTTVPSTNPTIISPSPPQPPTNATTTTTITSPTVVTNPRNPPQPNNNNNSNNIPYSLPNMNNLFSTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLEAIDNREREQVAQQEAWRIQEMARINREHELLVQERSTAAAKNAAVIAFLQQLSGQHQNSTTQANFPQQPPPQKVTIVQPPPQQAPQPQAPLVLSNSDNMEIQKMNNGHSVVTATVTATATPTPTTTFVAAATAITTTPSSLSSLSSSRWPKTEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFNELEALYKEKSKTQNPFGASFHNMKPHEMMEPLMVQPEQQWRPPSQYEQGAAKENNNNERKEREEEEEDEEEEEEEEEDENEEGDLESVEDEGGNRYEIATNKLSSVDTVE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02148 650 CDD GT1 68 133 - -
Gma10g02148 650 Pfam Myb/SANT-like DNA-binding domain 68 154 IPR044822 -
Gma10g02148 650 Pfam Myb/SANT-like DNA-binding domain 458 545 IPR044822 -
Gma10g02148 650 PANTHER - 3 640 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 220 272 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 383 398 - -
Gma10g02148 650 SMART sant 66 128 IPR001005 -
Gma10g02148 650 SMART sant 456 518 IPR001005 -
Gma10g02148 650 MobiDBLite consensus disorder prediction 368 398 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 206 281 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 577 650 - -
Gma10g02148 650 ProSiteProfiles Myb-like domain profile. 452 516 IPR001005 -
Gma10g02148 650 ProSiteProfiles Myb-like domain profile. 68 126 IPR001005 -
Gma10g02148 650 MobiDBLite consensus disorder prediction 37 60 - -
Gma10g02148 650 Gene3D - 70 131 - -
Gma10g02148 650 Gene3D - 460 521 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 578 592 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 1 68 - -
Gma10g02148 650 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 3 640 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 602 628 - -
Gma10g02148 650 CDD GT1 459 523 - -
Gma10g02148 650 MobiDBLite consensus disorder prediction 368 382 - -
Gma10g02148 650 Coils Coil 588 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02148 Gma-Chr10 48983476 48986219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02148 66 579 Trihelix Transcription Factor Family AT1G76890 47.300 1.75e-143 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma10g02148 Myb_DNA-bind_4 2.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02148 - - gsj:114370603 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02148 10 48983476 48986219 Gma10g02148 10 48983476 48986219 ECH
Gma10g02148 10 48983476 48986219 Gma20g01566 20 42729286 42732538 GST
Gma16g01494 16 34330920 34333946 Gma10g02148 10 48983476 48986219 PCT
Gma02g00737 02 7144262 7147474 Gma10g02148 10 48983476 48986219 PCT
Gma10g02148 10 48983476 48986219 Gma16g01494 16 34330920 34333946 PCT
Gma10g02148 10 48983476 48986219 Gma02g00737 02 7144262 7147474 PCT