Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02140 ATGATGGCGTCTTCCAATTCACGAAAATCAGAAACTTCCCCTTCTCCCGCCCCGCAATTCACCACCACCAACTTCATCCCCATCCCCGCCGCCGCAGCCCCTAAAACCGTCGATGACGTGTGGCAGGAGATCGTGACCGGCGACCGCCGCGAGTGCAAGGAGGAGGCCCTcgacgacgacgacgacgacgacaacgagatgatgactctcgaggacttcctcgccaaggccgacgccgtggacgacgctgaccatgaccatgaccatgcccatgaccacgaccccgactaccacaacgacgacgTCAAGATGCCAATGCCCCTCACCGAGAGGCTCGGCAGCGGCACCCTCTTCTCCTTCGACCACCTTCCCACGACGCCGTTTCACGACCCCTCCGAAGGCTCCGTCATAGGGTTCGGAAACGGCGTCGAGGTCATCGAATGCGGAAGGGGTAAAAGATCGCGTCCCGTTTTGGAGCAGTTGGATAAGGCCGCGCAACAGAGGCAGAGGAGGATGATCAAAAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAACAGGCTTACCAAGTGGAATTGGAGTCTTTGGCGGTGAAACTAGAGGAGGAAAATGACAAGCTCTTGAAGGAAAAGGCTGAGAGGAAAAAGAAGAGGTACAAGCAGctaatggaaaaagtactccctattgcgcagaagcaaaagccaccatgtatactccgtagggctcgctccttgcaatggtag 744 0.3992 MMASSNSRKSETSPSPAPQFTTTNFIPIPAAAAPKTVDDVWQEIVTGDRRECKEEALDDDDDDDNEMMTLEDFLAKADAVDDADHDHDHAHDHDPDYHNDDVKMPMPLTERLGSGTLFSFDHLPTTPFHDPSEGSVIGFGNGVEVIECGRGKRSRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKKRYKQLMEKVLPIAQKQKPPCILRRARSLQW 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02140 247 Pfam bZIP transcription factor 165 224 IPR004827 GO:0003700|GO:0006355
Gma10g02140 247 SUPERFAMILY Leucine zipper domain 167 216 IPR046347 GO:0003700|GO:0006355
Gma10g02140 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Gma10g02140 247 SMART brlzneu 163 225 IPR004827 GO:0003700|GO:0006355
Gma10g02140 247 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 246 IPR043452 GO:0003700|GO:0045893
Gma10g02140 247 MobiDBLite consensus disorder prediction 1 26 - -
Gma10g02140 247 CDD bZIP_plant_BZIP46 167 207 - -
Gma10g02140 247 Gene3D - 165 221 - -
Gma10g02140 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 217 IPR004827 GO:0003700|GO:0006355
Gma10g02140 247 Coils Coil 186 225 - -
Gma10g02140 247 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 31 246 - -
Gma10g02140 247 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02140 Gma-Chr10 48884025 48887219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02140 35 247 bZIP Transcription Factor Family AT5G44080 52.727 8.27e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma10g02140 bZIP_1 1.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02140 K14432 - gmx:100808917 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02140 10 48884025 48887219 Gma20g01574 20 42839941 42843031 GST