Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02131 ATGGATCCTCATACTGAAGAGTTGCCTCAGTACATACATATAAATCAGAATGAGTTTTGCATACGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATGATGCTGATGACCCTGACAATGCATGTGGGGATAGCTGCCTGAATGTATTAACCAGCACTGAATGCACCCCTGGTTATTGTCATTGTGATATATTATGCAAAAATCAGAAATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGGATATTAAGGCAGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAAATCAAGGTCTTAAAGATGCATTTATCATTTTCCTTAATGTGTCTGAATCTATTGATGCAACCAGGAAAGGAAGCCTTGCTAGATTTATAAATCATTCCTGTCAACCGAACTGTGAGACGAGAAAATGGAATGTGTTGGGGGAAATAAGAGTTGGAATATTTGCAAAACATGATATTCCTATTGGAACTGAGTTAGCTTATGATTATAATTTTGAATGGTTTGGTGGTGCCAAGGTTCGTTGCCTCTGTGGTGCACTAAAATGTTCTGGATTCCTTGGAGCAAAATCTCGAGGTTTTCAGGAGGATACTTATCTATGGGAAGATGATGATGGCAGGTACTCAGTTGAGAAAATTCCTGTATATGATTCTGCAGAGGATGAACCGGTGTCAAATTTTAATGGACGAACCGAACCCTCTTTGGATGTTATAGTTAAAGCTGAGCAATTATCGGAGTCCACTGCTTTCCATGTTCAGCCCCTTGATTCAGTTCAGATGAAAGATTTAGATGTTAAGAAGATTAAAACTGATGTAGCAGACGAGGATATGAACTTTTATTCACAGGATAGTGAACATACCCTTTCTCAAAAGAATGCAATATCACATATCCGAAGTAATACTGCAGGCAGAAACTATTGCCTTGGACCTAGGTCCATGTCTACCAAAAGATCAAGGGCATATAATGGTGGAAGGTTCAAAAATCTCATAGAGAAGAAGATCGATGTTAAGTTTGCTGCTGCCCTCCTAGCATCCAAGGAAGCACAAGAGGAGATTTTTAATTGTGAGAAAATGAAGGATGATGCTACATCTGCTCTTGATTCCTTATATGATGAAATACGGCCTGCCATTGAAGAACACGAGAGGGATAGCCAAGACAGTGTATCCACGACTGTAGCAGAGAAGTGGATACAGGCTTGCTGCCTGAAATTAAAGGCGGAGTTTGACCTTTACTCATCCATTGTCAAAAATGTTGCTTGCACTGCGCAAAGGGCATCTGGCCAAGTAAAACCTACTGAAGTTGATAACGAAAACGAAATTAAGCTCCTGACAGGTTGA 1443 0.3978 MDPHTEELPQYIHINQNEFCIRRHKKQKEEDIAICECKYDADDPDNACGDSCLNVLTSTECTPGYCHCDILCKNQKFQKCEYAKTKLFKTEGRGWGLLADEDIKAGQFVIEYCGEVISWKEAKRRSQAYENQGLKDAFIIFLNVSESIDATRKGSLARFINHSCQPNCETRKWNVLGEIRVGIFAKHDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSGFLGAKSRGFQEDTYLWEDDDGRYSVEKIPVYDSAEDEPVSNFNGRTEPSLDVIVKAEQLSESTAFHVQPLDSVQMKDLDVKKIKTDVADEDMNFYSQDSEHTLSQKNAISHIRSNTAGRNYCLGPRSMSTKRSRAYNGGRFKNLIEKKIDVKFAAALLASKEAQEEIFNCEKMKDDATSALDSLYDEIRPAIEEHERDSQDSVSTTVAEKWIQACCLKLKAEFDLYSSIVKNVACTAQRASGQVKPTEVDNENEIKLLTG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02131 480 Gene3D SET domain 1 234 IPR046341 -
Gma10g02131 480 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0018024
Gma10g02131 480 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Gma10g02131 480 Pfam AWS domain 42 80 IPR006560 GO:0005634|GO:0018024
Gma10g02131 480 SMART set_7 83 206 IPR001214 GO:0005515
Gma10g02131 480 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0018024
Gma10g02131 480 Pfam SET domain 94 200 IPR001214 GO:0005515
Gma10g02131 480 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Gma10g02131 480 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 4 419 - -
Gma10g02131 480 PANTHER SET DOMAIN PROTEINS 4 419 - -
Gma10g02131 480 SUPERFAMILY SET domain 9 220 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02131 Gma-Chr10 48798989 48805209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02131 65 222 C2H2 Transcription Factor Family AT2G23740 34.831 6.74e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma10g02131 SET 1.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02131 - - gmx:100804657 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02131 10 48798989 48805209 Gma10g02131 10 48798989 48805209 ECH
Gma10g02131 10 48798989 48805209 Gma20g01582 20 42919648 42929511 GST