Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02129 ATGATGGCTGGTGTTAGTGGCAGTAGCACTACTCCCTTATTGTGCTCTTTGTTCTTTATTTCTTCCTTACTTTTTGCTTCCTGCACCCATGCCTCCTCCCAGGCACCTCCTCCAATTGTGGATGGACTTTCATGGGATTTCTATAGGACGAGCTGTCCCATGCTTGAAGGGATAGTGAGCAAGCATCTCCAGAAGGTGTTCAAGAAGGACAATGGTCAAGCTCCTGCCTTACTCAGGATCTTCTTCCATGACTGCTTTGTTCAGGGTTGCGATGGGTCGATATTGTTGGATGGAAGTCCAAATGAAAAGGATCAACCGGCAAACATAGGGATAAGGCCAGAGGCTTTGCAGACCATTGAAAATCTTCGATCTCTTGTTCACAAGCAGTGTGGAAGGGTCGTCTCTTGCGCTGACCTCGTTGTTCTAGCCGCACGCGATGCTGTTTCTCTGTCAGGGGGGCCAATATTTCCCGTGCCACTGGGAAGAAAAGATGGTCTAACTTTCAGCATAGACGGCACAGGAAACCTTCCGGGACCGTCTTCCCGAACCGGCCAGCTCCTCGACAGATTTGCCGGCAGAAACTTCGACGCCACCGACGTGGTCGCGCTCTCCGGCGCTCACACCTTCGGACGGGCCCACTGCGCCACATTCTTCAGCCGCATCAACCAGACGGACCCACCCATCGACCCTACCTTGAACAACAACCTCATCAAAACTTGTCCCTCTTCCCAGTCCCCCAACACGGCCGTGCTTGACGTGAGAACCCCCAACGTGTTCGACAACAAGTACTACGTTAACCTCGCCAACCGACAGGGTCTGTTTACCTCGGACCAGGACCTGTTCGGTGATGCCCGGACTAAGGGAATAGTTAACTCCTTTGCTGAAAACCAGAAACTGTTCTTTGAAAAGTTTTCAAATGCTGTTGTTAAGTTGAGTCAGTTGGATGTGTTGACCGGGAAACAAGGACAGATTCGCGCCAAATGCTCCGTCCCCAACAAGAAGAAGGTGGTCACCTCTGTGGTGGAAGAAGAGGGAGTGGATTTAAGCGCTCAGATGAGTGCTATTTTCAGCTTTCTTCTCATCTGCATCTTTCTTTCTGTTTACAATATCAAAGTGTGTGAGGCACAAGCCAAGCCTCCCACAGCGAAGGGGCTATCATATAACTTCTACGACAAAAGCTGTCCTAAGCTTAAATCTATCGTTAGATCAGAGCTCAAAAAGGTCTTCAACAAGGACATTGCTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGGGTCAGTGTTATTGGATGGATCAGCAAGTGGGCCGGGTGAGAAAGAAGCACCACCAAACTTGACTTTGAGACCTGAGGCCTTTAAGATAATCGAAAACCTTCGTGGTCTTTTAGAGAAGAGCTGTGGAAGAGTGGTCTCCTGCTCCGACATCACTGCCCTCACTGCACGAGATGCTGTTTTCCTTTCAGGAGGACCAGACTATGAGATTCCTTTGGGAAGGAGAGACGGGCTAACCTTTGCCACAAGACAAGTGACATTGGACAACCTTCCACCACCTTCAAGCAACGCCTCAACCATCCTAAGCTCCCTCGCCACCAAAAACCTCGACCCAACCGATGTCGTAGCCCTCTCAGGTGGCCACACCATAGGCATCAGCCACTGCGGTTCCTTCACCAACAGGCTCTACCCCACCCAAGACCCCGTCATGGACAAGACCTTCGGCAACAACCTCAGACGCACGTGCCCCGCCGCCAACACCGACAACACCACCGTTCTTGACATCCGATCCCCCAACACCTTCGACAACAAGTACTACGTTGACCTCATGAACCGCCAGGGCCTCTTCACCTCCGACCAAGACCTTTACACTAATACGAGGACTAAGGGCATTGTCACCGACTTTGCCGTTAACCAGAGCCTCTTCTTTGACAAGTTTGTGTTCGCTATGCTCAAGATGGGTCAGCTTAATGTGCTCACGGGGAATCAAGGGGAGATTCGTGCCAATTGCTCCGTTAGAAATGCCAATAACAAGTCCCTCTTGACTTCTGTGGTGCAAGACGTGGTCGAAACTTTGATAGAAATGTAA 2106 0.5066 MMAGVSGSSTTPLLCSLFFISSLLFASCTHASSQAPPPIVDGLSWDFYRTSCPMLEGIVSKHLQKVFKKDNGQAPALLRIFFHDCFVQGCDGSILLDGSPNEKDQPANIGIRPEALQTIENLRSLVHKQCGRVVSCADLVVLAARDAVSLSGGPIFPVPLGRKDGLTFSIDGTGNLPGPSSRTGQLLDRFAGRNFDATDVVALSGAHTFGRAHCATFFSRINQTDPPIDPTLNNNLIKTCPSSQSPNTAVLDVRTPNVFDNKYYVNLANRQGLFTSDQDLFGDARTKGIVNSFAENQKLFFEKFSNAVVKLSQLDVLTGKQGQIRAKCSVPNKKKVVTSVVEEEGVDLSAQMSAIFSFLLICIFLSVYNIKVCEAQAKPPTAKGLSYNFYDKSCPKLKSIVRSELKKVFNKDIAQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPGEKEAPPNLTLRPEAFKIIENLRGLLEKSCGRVVSCSDITALTARDAVFLSGGPDYEIPLGRRDGLTFATRQVTLDNLPPPSSNASTILSSLATKNLDPTDVVALSGGHTIGISHCGSFTNRLYPTQDPVMDKTFGNNLRRTCPAANTDNTTVLDIRSPNTFDNKYYVDLMNRQGLFTSDQDLYTNTRTKGIVTDFAVNQSLFFDKFVFAMLKMGQLNVLTGNQGEIRANCSVRNANNKSLLTSVVQDVVETLIEM 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02129 701 ProSitePatterns Peroxidases active site signature. 416 427 IPR019794 GO:0004601
Gma10g02129 701 Pfam Peroxidase 60 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 Pfam Peroxidase 401 643 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 ProSitePatterns Peroxidases proximal heme-ligand signature. 546 556 IPR019793 -
Gma10g02129 701 PRINTS Plant peroxidase signature 394 413 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 418 438 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 459 472 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 478 488 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 497 512 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 545 557 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 598 613 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 614 631 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Plant peroxidase signature 654 667 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 SUPERFAMILY Heme-dependent peroxidases 380 680 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 ProSiteProfiles Plant heme peroxidase family profile. 42 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 Gene3D - 46 329 - -
Gma10g02129 701 Gene3D - 388 677 - -
Gma10g02129 701 CDD secretory_peroxidase 384 678 IPR033905 GO:0004601|GO:0042744
Gma10g02129 701 SUPERFAMILY Heme-dependent peroxidases 37 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 CDD secretory_peroxidase 42 330 IPR033905 GO:0004601|GO:0042744
Gma10g02129 701 PANTHER PEROXIDASE 25-RELATED 369 684 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 PANTHER PEROXIDASE 25-RELATED 20 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Gma10g02129 701 ProSiteProfiles Plant heme peroxidase family profile. 384 680 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g02129 701 Gene3D Peroxidase, domain 2 525 660 - -
Gma10g02129 701 Gene3D Peroxidase, domain 2 178 312 - -
Gma10g02129 701 PANTHER PEROXIDASE 20 336 - -
Gma10g02129 701 PANTHER PEROXIDASE 369 684 - -
Gma10g02129 701 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02129 Gma-Chr10 48783363 48793691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02129 350 701 Peroxidase AT1G71695 59.664 3.09e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02129 K00430 - gmx:100804126 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02129 10 48783363 48793691 Gma10g02129 10 48783363 48793691 ECH