LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma10g02097	ATGTCTCAAACAACAGCTCAAGTTTCCAAGACCAAGCCAATGGAAAACCTTTCACCATTGATTTACAAAAACCCCATTAGAAGAACTTCTAGGCGATCTACAATGTATCttggtgtgagaaaaaggccatggggaagatatgctgctgagattaggaacccatacaccaaagagagacactggctaggcacatttgacactgctgaagaggctgctatagcttatgatCTTTCATCTATCAAGATTTGTGGCATTAATGCTCGAACTAATTTTCACTACCCTTTTGTGTCTCTTCCACCACTTCCTATGTCGTCATTGCCTCCTCCACCGCCACCGCCGACCCCAGAGTTGGATCCAAGTGTTGAAGTTTGTCTAGAGATGATGAATGCTGCTTCTTACGATGGTGATGATGAATCTCTTGTTATTGCTTCCATTTTGCAAAGTTTTTCTAATTCTGGTAACTGTTCTTTTTAG	474	0.3038	MSQTTAQVSKTKPMENLSPLIYKNPIRRTSRRSTMYLGVRKRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAIAYDLSSIKICGINARTNFHYPFVSLPPLPMSSLPPPPPPPTPELDPSVEVCLEMMNAASYDGDDESLVIASILQSFSNSGNCSF	157

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma10g02097	157	ProSiteProfiles	AP2/ERF domain profile.	35	92	IPR001471	GO:0003700\|GO:0006355
Gma10g02097	157	PANTHER	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	14	148	-	-
Gma10g02097	157	SMART	rav1_2	35	98	IPR001471	GO:0003700\|GO:0006355
Gma10g02097	157	SUPERFAMILY	DNA-binding domain	35	93	IPR016177	GO:0003677
Gma10g02097	157	Gene3D	AP2/ERF domain	35	93	IPR036955	GO:0003700\|GO:0006355
Gma10g02097	157	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088	14	148	-	-
Gma10g02097	157	CDD	AP2	36	91	IPR001471	GO:0003700\|GO:0006355
Gma10g02097	157	PRINTS	Ethylene responsive element binding protein signature	36	47	IPR001471	GO:0003700\|GO:0006355
Gma10g02097	157	PRINTS	Ethylene responsive element binding protein signature	58	74	IPR001471	GO:0003700\|GO:0006355
Gma10g02097	157	Pfam	AP2 domain	37	82	IPR001471	GO:0003700\|GO:0006355

Showing 1 to 10 of 10 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma10g02097	Gma-Chr10	48500422	48501044	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma10g02097	36	108	AP2-EREBP Transcription Factor Family	AT1G12890	68.919	4.22e-30	107

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Gma10g02097		AP2	3.8e-10	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma10g02097	-		-	gmx:100816937	285.419

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g02097	10	48500422	48501044	Gma20g01620	20	43277140	43277568	GST

Showing 1 to 1 of 1 entries