Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02097 ATGTCTCAAACAACAGCTCAAGTTTCCAAGACCAAGCCAATGGAAAACCTTTCACCATTGATTTACAAAAACCCCATTAGAAGAACTTCTAGGCGATCTACAATGTATCttggtgtgagaaaaaggccatggggaagatatgctgctgagattaggaacccatacaccaaagagagacactggctaggcacatttgacactgctgaagaggctgctatagcttatgatCTTTCATCTATCAAGATTTGTGGCATTAATGCTCGAACTAATTTTCACTACCCTTTTGTGTCTCTTCCACCACTTCCTATGTCGTCATTGCCTCCTCCACCGCCACCGCCGACCCCAGAGTTGGATCCAAGTGTTGAAGTTTGTCTAGAGATGATGAATGCTGCTTCTTACGATGGTGATGATGAATCTCTTGTTATTGCTTCCATTTTGCAAAGTTTTTCTAATTCTGGTAACTGTTCTTTTTAG 474 0.3038 MSQTTAQVSKTKPMENLSPLIYKNPIRRTSRRSTMYLGVRKRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAIAYDLSSIKICGINARTNFHYPFVSLPPLPMSSLPPPPPPPTPELDPSVEVCLEMMNAASYDGDDESLVIASILQSFSNSGNCSF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02097 157 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Gma10g02097 157 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 148 - -
Gma10g02097 157 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Gma10g02097 157 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Gma10g02097 157 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Gma10g02097 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088 14 148 - -
Gma10g02097 157 CDD AP2 36 91 IPR001471 GO:0003700|GO:0006355
Gma10g02097 157 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Gma10g02097 157 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Gma10g02097 157 Pfam AP2 domain 37 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02097 Gma-Chr10 48500422 48501044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02097 36 108 AP2-EREBP Transcription Factor Family AT1G12890 68.919 4.22e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g02097 AP2 3.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02097 - - gmx:100816937 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02097 10 48500422 48501044 Gma20g01620 20 43277140 43277568 GST