Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02084 ATGGAGCCTCTCTCTTCCACCAAACACAACAACAATCTCTCCAAGCCTTCCTCCCTCCACACGGAGGCTCCGCCGCCGGAGGCCAGTCCCCTCCGGAAGATCATGGTGGTGGCCTCCATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTACAGCTCTCTCTACTTACCCCTTACGTCCAACTGCTGGGGATTCCCCACACTTGGGCCGCCTTCATCTGGCTCTGCGGCCCAATCTCCGGCATGCTCGTCCAGCCCATCGTGGGATACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCGCCGCCGGCTCCCTCGCCGTCGCCATCGCCGTCTTCCTTATCGGCTACGCCGCCGACCTCGGCCACATGTTCGGCGACTCCCTAGCCAAAAAAACCCGCCCCCGCGCCATCGCCATCTTCGTTGTCGGCTTCTGGATCCTCGACGTCGCAAACAACATGCTACAAGGCCCCTGCCGCGCCCTCCTGGCCGACCTCTGCGCCGGAGACCACCGGAAAACGCGAAACGCCAACGCCTTCTTCTCCTTCTTCATGGCCGTCGGAAACGTCCTGGGCTACGCCGCGGGCTCTTACAGCGGCCTCCACAACGTCTTCCCTTTCACTAAAACAAAAGCATGTGATGTTTACTGCGCGAATTTGAAGAGTTGTTTCTTCCTCTCCATCGCGCTTCTTCTCACTCTCTCCACAATCGCCTTGACCTACGTGAAGGAGAAAACGGTGTCGTCAGAGAAAACGGTGAGGAGTTCGGTGGAGGAGGATGGGTCCCACGGGGGCATGCCGTGCTTCGGGCAGTTATTCGGTGCGTTCCGCGAACTGAAGCGTCCCATGTGGATCCTTCTGTTGGTGACGTGTCTGAACTGGATCGCCTGGTTCCCTTTTTTGCTATTCGACACCGACTGGATGGGGCGTGAGGTGTACGGAGGGACAGTAGGGGAAGGGAAGGCGTACGATAGGGGTGTCCGTGCGGGTGCGTTGGGGCTGATGTTGAACTCTGTTGTGCTTGGTGCGACGTCGTTGGGAGTGGAAGTGCTGGCGCGTGGGGTTGGGGGCGTCAAGAGGCTGTGGGGGATTGTTAACTTCTTGCTCGCGGTTTGTTTGGCCATGACGGTTTTGGTTACTAAGATGGCCCAACATTCTCGACAATACACCCTACTCCCCAACGCCCACCAGGAACCCCTGCCTCCTCCCGCCGCCGTCAAAGCCGGCGCGTTGGCTCTCTTCTCTCTCCTCGGAATCCCACTCGCGATTACTTACAGCATACCCTTTGCTCTAGCATCAATATTCTCCAGCACCTCAGGGGCAGGCCAAGGTTTGTCTCTGGGAGTGCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGATAAGTGGACCATGGGATGCTCTATTTGGAGGTGGTAACTTGCCAGCGTTCGTGGTGGGTGCGGTGGCGGCGGCCGCCAGTGGCATTTTATCCATAATCCTGCTGCCATCTCCACCACCGGATTTGGCCAAAGCAGCAACGGCAGCCGGAGGAGGATTCCACTAA 1566 0.5913 MEPLSSTKHNNNLSKPSSLHTEAPPPEASPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSLAVAIAVFLIGYAADLGHMFGDSLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLCAGDHRKTRNANAFFSFFMAVGNVLGYAAGSYSGLHNVFPFTKTKACDVYCANLKSCFFLSIALLLTLSTIALTYVKEKTVSSEKTVRSSVEEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDRGVRAGALGLMLNSVVLGATSLGVEVLARGVGGVKRLWGIVNFLLAVCLAMTVLVTKMAQHSRQYTLLPNAHQEPLPPPAAVKAGALALFSLLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVISGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02084 521 MobiDBLite consensus disorder prediction 1 19 - -
Gma10g02084 521 CDD MFS_SLC45_SUC 34 481 - -
Gma10g02084 521 PANTHER SUGAR TRANSPORTER 21 512 - -
Gma10g02084 521 MobiDBLite consensus disorder prediction 1 26 - -
Gma10g02084 521 Gene3D MFS general substrate transporter like domains 29 515 IPR036259 -
Gma10g02084 521 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 21 512 - -
Gma10g02084 521 Pfam MFS/sugar transport protein 42 300 - -
Gma10g02084 521 SUPERFAMILY MFS general substrate transporter 34 506 IPR036259 -
Gma10g02084 521 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 507 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02084 Gma-Chr10 48366281 48369914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02084 8 521 Sucrose Transporter Gene Family AT1G22710 68.077 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02084 K15378 - gmx:547679 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01431 16 33352599 33356123 Gma10g02084 10 48366281 48369914 PCT
Gma02g00682 02 6590598 6594050 Gma10g02084 10 48366281 48369914 PCT