Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02047 ATGGAGTACAAAGTGAAAACCACAACATCAACACCTTCTCCACCAATCCCAATCCATGTTCCCACTATGCTGTCAAACTCTCCTCCATCTTCATCTTCTTCACCTCCTTCACAATCTCCCACTCCTTTCCCTTCACCCTCTCTGGGCTCTCCCTCTGCTGCTCCACCGTCTCCGCCGCCGCCTCTGCCACCGGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGTAGGTGTGTGGAGAAGTGTGTGTTGGCTCCATATTTCCCTCCCACTGATCCTCTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTGCCAGAATCCCAGAGAGAAGATGCTGTGAGCAGCATGGTTTATGAGGCAAATGCTAGGATCAGAGACCCAGTTTATGGGTGTGCTGGTGCAATATGCCAACTTCAAAAGCAAGTTAGTGAGCTACAAGCACAGCTGGCCAAAGCACAAGCTGAGGTAGTGAACATGCAGTGCCAACAAGCCAATTTAGTGGCGCTTATTTGCATGGAAATGAGTCAATCACAGGAGCAGCACGTGCTTCAGCCTCAAACTCACGTTGATATGAGCTGCTTCATAGAGGACAACAGTTTTGGGACTGCTTGGGAGCCTCTTTGGACATGA 669 0.5037 MEYKVKTTTSTPSPPIPIHVPTMLSNSPPSSSSSPPSQSPTPFPSPSLGSPSAAPPSPPPPLPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALICMEMSQSQEQHVLQPQTHVDMSCFIEDNSFGTAWEPLWT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02047 222 ProSiteProfiles LOB domain profile. 68 169 IPR004883 -
Gma10g02047 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 55 210 - -
Gma10g02047 222 Pfam Lateral organ boundaries (LOB) domain 69 166 IPR004883 -
Gma10g02047 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 55 210 - -
Gma10g02047 222 Coils Coil 148 175 - -
Gma10g02047 222 MobiDBLite consensus disorder prediction 33 61 - -
Gma10g02047 222 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02047 Gma-Chr10 47993825 47995690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02047 65 222 AS2 family AT1G07900 72.393 3.43e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma10g02047 LOB 1.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02047 - - gmx:100779519 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02047 10 47993825 47995690 Gma20g01664 20 43760999 43762672 GST