Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02044 ATGGGGAGGAAAGGGGGTTGGTTTTCTGCAGTGAAGAGAGTTTTTGTTTCATATTCCAAAAAGGAACAGAAACAGCATCATCATAAGTCAAAGTTAGGATGTTTTGGGACTCATCACTATGAGGATCTAGAAGGAGCGCCAATTGCCGCTGTTCCTTCACTTCCACCAAGAAAAGACCCCAAACCAATAAGTGAGGCAGAGAATAATGAACAGAGCAAACAAGCCTTTTCTTTGGTTTTGGCCACTGCAGTGGCGGCAGGGGCTGCTGTTGCTGCTGCTGCTGCAGAGGTTACTCGTCTCACAAACACGCCTCGTTCTAATGGAAAAGCGAATCAAGAAATGACAGCTATCAAGATTCAAACAGCATACCGTGGATATTCGGCAAGAAAATCCTTGCGTGGCTTGAGAGGTTTGTCGAGGTTGAAAACGTTGGTGCAAGGGCAATCTGTTCAACGACAAGCGGCTACTACCTTGCAATGCATGCAAACTCTTTCACGGTTGCAGTCTCAGGTTCGTGCAAGGAAGGTCAGAATGTCTGAGGAGAATCAATCTCTTCAAAGGCAACTGCAGCAGAAACGTGAAAAGGAATTTGACAAGTCGCAAGCTAATCAGATTGGAGAGAAGTGGGATGATAGCTTGAAATCAAAGGAGCAAGTTGAAGCCAAATTGTTGAACAGGCAAGTAGCTGCTATGAGAAGAGAAAAGGCTTTGGCCTATGCATCAACACATCAACAAACGTGGAGGAACTCTTCAAAATCTGCTACAAATGCCACATTTATGGATCCAAACAATCCCCATTGGGGTTGGAATTGGCTAGAGCGATGGATGGCTGCAAGGCCGTGGGAGGGTCAAAACACTACATACCACATTGGCCATGCATCTGCCAAAAGTGTTGCAAGCCAAACCATGTCAGTTGGTGAAATTACTAAATTGTATTCTCTCCGTGATCAGAATAATGATATCAAAACTTCACCAGCAAACCAAAAACCAACCCGTCCCTGCAGCCACAATTCCCCTTCAACAACACCCTCAAAGGTCCCATTAGCCAATGGAGCAAAAACAAAGGTACTATCAAGTTCAAGGGGTGGTTCATGGGGGGGTGATGGTGACTCAAAAAGCATGTTCAGCAAAAACTTAGAAAACACTCGCAGGCACAGCATTGGAGTGTCTCAAGTGAGAGATGATGAGAGCAATTCAAGCTCATCACCGTCTACAAAGGTCGCAACCAAGGTAAAGTCATCATCATCATCATCCAAAGTGAGAAGTGCATCGTTTGGTGTACATAGAAATGGAACACCTGAAAAAGCAACTTCTGCTCCCCTAAAGAAGAGGCTTTCTTCCCCTGCTTCTCCAGCCGGTATAAGAAGGTATGCTGTTTCAACTAGGCCGGGAAATGTGGCTTCCAACAAGAGTGTTGCTAATGCTATACCATCTCTGATGAGGAGAAAGTGA 1452 0.4518 MGRKGGWFSAVKRVFVSYSKKEQKQHHHKSKLGCFGTHHYEDLEGAPIAAVPSLPPRKDPKPISEAENNEQSKQAFSLVLATAVAAGAAVAAAAAEVTRLTNTPRSNGKANQEMTAIKIQTAYRGYSARKSLRGLRGLSRLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQSLQRQLQQKREKEFDKSQANQIGEKWDDSLKSKEQVEAKLLNRQVAAMRREKALAYASTHQQTWRNSSKSATNATFMDPNNPHWGWNWLERWMAARPWEGQNTTYHIGHASAKSVASQTMSVGEITKLYSLRDQNNDIKTSPANQKPTRPCSHNSPSTTPSKVPLANGAKTKVLSSSRGGSWGGDGDSKSMFSKNLENTRRHSIGVSQVRDDESNSSSSPSTKVATKVKSSSSSSKVRSASFGVHRNGTPEKATSAPLKKRLSSPASPAGIRRYAVSTRPGNVASNKSVANAIPSLMRRK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02044 483 MobiDBLite consensus disorder prediction 316 469 - -
Gma10g02044 483 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Gma10g02044 483 Coils Coil 214 234 - -
Gma10g02044 483 MobiDBLite consensus disorder prediction 316 366 - -
Gma10g02044 483 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gma10g02044 483 Coils Coil 168 195 - -
Gma10g02044 483 MobiDBLite consensus disorder prediction 49 70 - -
Gma10g02044 483 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 483 - -
Gma10g02044 483 MobiDBLite consensus disorder prediction 178 202 - -
Gma10g02044 483 MobiDBLite consensus disorder prediction 374 425 - -
Gma10g02044 483 PANTHER IQ-DOMAIN 5-RELATED 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02044 Gma-Chr10 47959542 47961903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02044 1 452 IQD Protein Family AT5G03040 41.612 3.41e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02044 - - gmx:100807307 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02044 10 47959542 47961903 Gma20g01667 20 43797085 43800825 GST