Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02012 atggccgcggaagctttgaagggtagccaccttgatgaggtgaagcgcatggtggaggactaccgtaaccccgtggtgacgttgggtggcaagagcctcaccgtgtctcaggtggcggcggttgccacccaccaccacggcggagttacggTGAAGCTGGCCAAGGAGACCCATCGCGGTGTCAAGGCCAGCAGTGACTGGGTCATGGATAGCATGGTTAAGGGCACTGATAGCTACGGGGTTACCACAGGGTTTGGTGCAACCTCACATAGGAGAACCAAGCAAGGTGGTGCCCTCCAAACCGAACTCATCAGATTTTTGAATGCTGGCATTTTTGGCAATGGAACAGAATCTTGTCACACCTTACCTCACTCAGCTACAAGGGCAGCCATGTTGGTTAGGATCAATACCTTGCTTCAAGGATACTCAGGCATTAGATTTGAAATCATGGAGGCCATCACCAAGTTTTTGAACCATAACATAACCCCATGTCTTCCTCTACGTGGTACAATCACTGCATCAGGTGACTTGGTTCCTTTATCATATGTTGCTGGCCTCTTGATTGGAAGGCCAAACTCCAAGTCTATTGGACCTAATGGACAAGTTCTTAATGCTAAAGAGGCCTTTCAACTAGCTGGAATAGATGGTGGTTTCTTTGAGTTGCAACCTAAAGAGGGTTTGGCACTAGTGAATGGCACTGCAGTAGGATCTGGCTTGGCTTCCACGGTTCTTTTTGAGGCAAATTTGCTTGTCATCCTTTCAGAAGTTTTGTCTGCAATTTTTGCTGAAGTCATGCAAGGAAAACAAGAATTCACAGACCACTTGACTCATAAATTGAAGCACCACCCTGGCCAAATTGAGGCTGCAGCTATCATGGAACATATATTAGATGGAAGCTCATATGTTAAGGCAGCACAGAAGTTACATGAGATTGATCCACTTCAAAAGCCTAAACAAGATAGGAATAAGGCACTCCATGGGGGGAATTTCCAAGGTACCCCAATTGGTGTTTCAATGGATAACACCCGTTTGGCTATTGCATCAATTGGTAAACTTATGTTTGCCCAGTTCTCTGAACTTGTGAATGACTTCTACAACAATGGTTTGCCTTCAAATCTAACAGCTAGTCGCAATCCAAGCTTAGACTATGGATTCAAAGGTGCTGAAATTGCAATGGCATCCTATTGTTCAGAACTCCAATACCTTGCCAATCCTGTTACCACTCATGTCCAGAGTGCTGAGCAACATAACCAAGATGTGAACTCTTTAGGCTTAATTTCCTCTAGAAAGACAGCTGAAGCAATAGATGTATTAAAGCTCATGTCATCCACTTTCTTAGTTGCTTTGTGCCAAGCCATTGATTTGAGGCATTTGGAGGAAAACTTGAAGAACACTGTTAAGAATACCGTTAGTCAAGTGGCCAAAAGAGTTCTCACAGTTGGCATCAATGGCGAGTTACATCCTTCTAGGTTTTGTGAGAAGGACTTACTCAAAATTGTTGATCGTGAGTATGTCTATGCTTACATTGATGACCCCTGTAGTGCAACCTACCCTCTGATGCAAAAGTTGAGATTAGTCCTAGTTGATCATGCATTGCAAAATGGTGACAAAGAGGCGAGTTCAAGTACCTCAATTTTCCAAAAGATTGGTGCCTTTGAAGAAGAGCTCAATGCCCTTTTGCCCAAAGAGGTGGAAAGTGCTAGGATTGAAGTTGAGAATGGAAATCCTGCTATTCCTAACCGAATTAAGGAATGCAGGTCTTACCCATTATATAAGTTTGTGAGAGAAAATTTGGGTACAACTTTGCTAACAGGAGAGAAAGTCAAGTCACCTGGTGAGGAATCTGATAAGGTATTTACTGCATTGTGTGAAGGGAAGTTCATCGATCCTTTGTTGGACTGTCTAAAAGAGTGGAATGGTGCTCCTCTACCAATATGCTGA 1941 0.3946 MAAEALKGSHLDEVKRMVEDYRNPVVTLGGKSLTVSQVAAVATHHHGGVTVKLAKETHRGVKASSDWVMDSMVKGTDSYGVTTGFGATSHRRTKQGGALQTELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEIMEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGQVLNAKEAFQLAGIDGGFFELQPKEGLALVNGTAVGSGLASTVLFEANLLVILSEVLSAIFAEVMQGKQEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAIDVLKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTVGINGELHPSRFCEKDLLKIVDREYVYAYIDDPCSATYPLMQKLRLVLVDHALQNGDKEASSSTSIFQKIGAFEEELNALLPKEVESARIEVENGNPAIPNRIKECRSYPLYKFVRENLGTTLLTGEKVKSPGEESDKVFTALCEGKFIDPLLDCLKEWNGAPLPIC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02012 646 Gene3D Fumarase/aspartase (Central domain) 322 509 - -
Gma10g02012 646 Gene3D Fumarase/aspartase (Central domain) 526 646 - -
Gma10g02012 646 Gene3D Fumarase/aspartase (Central domain) 234 321 - -
Gma10g02012 646 PANTHER HISTIDINE AMMONIA-LYASE 321 646 IPR001106 -
Gma10g02012 646 Gene3D - 1 233 IPR024083 -
Gma10g02012 646 SUPERFAMILY L-aspartase-like 2 646 IPR008948 GO:0003824
Gma10g02012 646 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 1 321 - -
Gma10g02012 646 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 321 646 - -
Gma10g02012 646 CDD PAL-HAL 31 456 IPR001106 -
Gma10g02012 646 PANTHER HISTIDINE AMMONIA-LYASE 1 321 IPR001106 -
Gma10g02012 646 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 169 185 IPR022313 GO:0016841
Gma10g02012 646 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 2 321 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gma10g02012 646 Pfam Aromatic amino acid lyase 317 469 IPR001106 -
Gma10g02012 646 Pfam Aromatic amino acid lyase 33 311 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02012 Gma-Chr10 47576925 47582695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02012 1 646 Monolignol Biosynthesis Gene Families AT3G53260 77.293 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02012 K10775 - gmx:100801470 1258.05