Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01987 ATGAAAAGAAAGGCCATGAGTTGTGACAACCGAGATGCTGTGAACAGAGGTGCTTGGTCAGCTGAGGAAGACCAAATCCTTATCAACTACGTTCAAGCCCATGGAGAAGGAAATTGGAGAGAGCTTTCCAAAAGAGCTGGCTTGAAAAGATGTGGGAAGAGTTGTAGACTCCGATGGCTGAATTATCTCAAGCCAGATATCAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATCAGACTACATAAGCTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGCTTACCAGGGCGAACAGACAATGAAATTAAGAACTATTGGAATACTTATTTGAGAAAGAAGACAGAGCACAAGGACAAGCATAACAAAATTCTTAGCCATAACAACAACATTCCTATCAAATTAAGAATTGAATCTCCACAGTGCTCAAAAAATTCCTCTGGTAATGTTCTTGATCCTGCAAAATCCCCTCACCCGATGAGGTGTACCAAGGTTATGATGCCAGTCAATGATTCAGTCAACACAATGAATTTGATTGCAACGAGCTGGGAGAATCATAACCCTTCTGCATCCATGCCACTAGATGACCATAATCATTGCTTAACAGGTGTCCTCCAAGACCTTGACATTAGTGACTTGTTAATGTCGTATGAGGATGATTGTCGTTTTAATGGATATGCTTGTGTCGAAATACCCCAACATATTTTTAAAGATGAGACTTGGAGGCTTGATGATTCGATGGGTGAAGAAGCATGGTATGAGAATTGGAAGATTGACACCTATTTTCCACAAGATATGGGGTTTTCTTCATTTTAA 825 0.4036 MKRKAMSCDNRDAVNRGAWSAEEDQILINYVQAHGEGNWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKTEHKDKHNKILSHNNNIPIKLRIESPQCSKNSSGNVLDPAKSPHPMRCTKVMMPVNDSVNTMNLIATSWENHNPSASMPLDDHNHCLTGVLQDLDISDLLMSYEDDCRFNGYACVEIPQHIFKDETWRLDDSMGEEAWYENWKIDTYFPQDMGFSSF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01987 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Gma10g01987 274 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Gma10g01987 274 SMART sant 15 65 IPR001005 -
Gma10g01987 274 SMART sant 68 116 IPR001005 -
Gma10g01987 274 CDD SANT 73 114 IPR001005 -
Gma10g01987 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Gma10g01987 274 Gene3D - 16 68 - -
Gma10g01987 274 Gene3D - 72 138 - -
Gma10g01987 274 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Gma10g01987 274 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 273 - -
Gma10g01987 274 CDD SANT 18 63 IPR001005 -
Gma10g01987 274 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 273 - -
Gma10g01987 274 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Gma10g01987 274 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Gma10g01987 274 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01987 Gma-Chr10 47213856 47223348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01987 1 117 MYB Transcription Factor Family AT3G13540 67.521 4.94e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma10g01987 Myb_DNA-binding 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01987 K09422 - gmx:100794570 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01987 10 47213856 47223348 Gma20g01724 20 44485203 44497118 GST