Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01986 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCTATTACCCCATTCAATTGGTGGTATCTCCAGGCAAATTCTCTTTCTTCCTGGAACGATACTAATAGCACATGGAGCAACCAACCAAACCCTAACTCTTCCTCTTCTTGTGAGGAGGATATATCAGTCTCTACATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACCGTTGAGTCCTCTCGCAGACTCATTGAGCCACCTGCTCCTTCCTCCACCGAGTTGATGGGAGAACACGCATCAGATAATCAACTTTGGAGTCATGTTTTATCAGGTGTTGGATCAGACGGCGAGTTACACAACAGCCAAGAAATTGGAGAGAATTTTCTGGATGCACTGTCATCCAAAAGCATGACAAGCACTATGTTTCAACCAGTGTGTGACTACTTGAAGAAACTAGATCATACAAGTTGGGAGTATAATGGTTCAACTTCACTAAATAGCTTTGAGAAGCACTTAAATGGGTTCAGTGAGGCGATGCTTGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTGAGCACTTGGTCTATTGCCCCACCAGACCCAGAAGTTAGTAGCCACTTTGATCCACAAAAAACAAACAACATGTCCTTGAGTTCTAATTCCATGGATCATCACTTCCCACAATTTGAACACTTCAAGCAACCTTTTGAAGAAGCAAGTAGAAACTCTGGAGTGTTCCCTAATTGCTATGATCATGACATGAAGGTCAAGCAAGAGTATCATGCAAGTGAAGTGTCACCAGGATCAGTATTTGGAAAACCATTAAATGCAAATGGATATCGAAATGGATTTAATAGCCTTTCAGTGGTAGATAGTTGCAAACTCTACCATGACATGCCCAATATTTCTTCATGCACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTAGATTGGGATGGCCAGTTATTGGAGTCCATGGTCAAAAGCCTAGTATGAAGTACCTGAACGTATCTGAACCAAAGAAGCAAGGTCTTCAGACACCATCACCACCGGTAATTAAGATAAGAACTAATGTTAATGGAAAAGGGGAGGGGACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTGAAAAAGCCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACAGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTTCTTGAAAGCTAATTCACACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATCATAAGGAGGACACAAAGCTAGACCTTCGAAGCAGAGGTCTGTGTTTAGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGAAAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1524 0.4147 MTEESAGNTVATSITPFNWWYLQANSLSSWNDTNSTWSNQPNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIEPPAPSSTELMGEHASDNQLWSHVLSGVGSDGELHNSQEIGENFLDALSSKSMTSTMFQPVCDYLKKLDHTSWEYNGSTSLNSFEKHLNGFSEAMLENNERLTKLSNLVSTWSIAPPDPEVSSHFDPQKTNNMSLSSNSMDHHFPQFEHFKQPFEEASRNSGVFPNCYDHDMKVKQEYHASEVSPGSVFGKPLNANGYRNGFNSLSVVDSCKLYHDMPNISSCTRNFSDVISFNSRLGWPVIGVHGQKPSMKYLNVSEPKKQGLQTPSPPVIKIRTNVNGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPFLKANSHKDPWGSLDRKDHKEDTKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01986 507 MobiDBLite consensus disorder prediction 33 73 - -
Gma10g01986 507 MobiDBLite consensus disorder prediction 381 395 - -
Gma10g01986 507 MobiDBLite consensus disorder prediction 336 360 - -
Gma10g01986 507 PANTHER TRANSCRIPTION FACTOR BHLH111 31 493 - -
Gma10g01986 507 MobiDBLite consensus disorder prediction 33 90 - -
Gma10g01986 507 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 385 434 IPR011598 GO:0046983
Gma10g01986 507 MobiDBLite consensus disorder prediction 336 396 - -
Gma10g01986 507 MobiDBLite consensus disorder prediction 361 380 - -
Gma10g01986 507 CDD bHLH_AtbHLH_like 400 442 IPR045239 -
Gma10g01986 507 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 493 - -
Gma10g01986 507 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 400 449 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01986 Gma-Chr10 47191533 47194886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01986 23 507 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.733 9.55e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01986 - - gmx:100793512 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01986 10 47191533 47194886 Gma20g01725 20 44506089 44509400 GST