Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01969 ATGCAGAAAACATACTCTTTCTCCTTCATATCCTCTAGTGGCAGTGATAGTGCCTGCTACTTAGAAGCTGACGAAGTTGACAATGAAGATTCCATTTCCCTCTCCCTTGCCCCTCCTAGCCAGCACCAATTCAAATCCAAGGTCTCTAACCCAAAACACTCTTCTACTATGCCTGATCACCACCAGCAAAACCCTGACCTCATCAGTGGTGTAACAGTGGCCCTCCACATTGGCCTTCCCACCACCAAACCTTCTTCTCCTACTCCGATTCACTGTCGATATTGGATCCCTACTCCTCAACAAATCCTCATTGGGCCCACCCAGTTTTCTTGCACTGTCTGTAACAAAACCTTCAACCGTTTCAACAACATGCAGTATAGGAAAGGAGCGGAGTCATTGAGAGGGTCAAAAGCAGGTTCTTCAATGCTGAGGCTACCCTGCTATTGCTGTGAAGAGGGTTGCAAAAACAACATAAACTATCCTAGGTCAAAGCCACTGAAGGATTTCAGGACCCTCCAAACACATTACAAGAGGAAGCACGGAGGGAAGCCATTCGAGTGCAGAAAGTGTCATAAGCCATTTGCAGTGAGAGGAGATTGGAGAACACACGAGAAGAATTGTGGAAAGCTTTGGTTCTGCGTCTGTGGTTCTGATTTCAAGCACAAGAGGTCCCTTAAAGATCATGTCCGTGCATTCGGCAATGGCCATGCTCCACATAACTTATTGAGTGAAGAAAGAGAGAATGAAGGTGGAGATGATGATGACAATGAAGTGGTTGTTTTTACTTTCAAATAA 795 0.4553 MQKTYSFSFISSSGSDSACYLEADEVDNEDSISLSLAPPSQHQFKSKVSNPKHSSTMPDHHQQNPDLISGVTVALHIGLPTTKPSSPTPIHCRYWIPTPQQILIGPTQFSCTVCNKTFNRFNNMQYRKGAESLRGSKAGSSMLRLPCYCCEEGCKNNINYPRSKPLKDFRTLQTHYKRKHGGKPFECRKCHKPFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGNGHAPHNLLSEERENEGGDDDDNEVVVFTFK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01969 264 Gene3D Classic Zinc Finger 123 210 - -
Gma10g01969 264 PANTHER ZINC FINGER PROTEIN WIP6 4 255 - -
Gma10g01969 264 MobiDBLite consensus disorder prediction 33 63 - -
Gma10g01969 264 PANTHER ZINC FINGER PROTEIN WIP2 4 255 IPR043584 GO:0003700|GO:0010468
Gma10g01969 264 MobiDBLite consensus disorder prediction 236 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01969 Gma-Chr10 46954513 46955697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01969 28 241 C2H2 Transcription Factor Family AT1G13290 65.385 8.58e-101 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma10g01969 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01969 - - gmx:100788243 543.117