Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01968 ATGTATTTTTTCACTGAGAAAATGCACAGTTTGAAGATGGGCTTCCCTGACTACATCCAAACATTGGAAGAAGAACGCCGTAAGATTCAGGTGTTCTCCAAAGAGCTACCTCTTTCCTTGGAACTGGTCACTCAAGCCATTGAAGCTTGCAAGCAGCAATTGTCTGGAACTGCGAGTGAGTATAATTTGAATGGCCACTCGGAGTGTTCGGAGCAGACAACATCAACGGAAGGGCCTGTTTTGGAGGAGTTTATTCCAATCAAGAAAATGGCATCATCATCCCCTTTTTGTGATGAAGAGGATGAGGATGATGAGCAACATTCTCACAAGCAAAGGGTTTCAAAGGAAAATAATAACAGTGATAAGAGGAAATCCGACTGGCTTAGATCTGTTCAGTTGTGGAATCCAGATCCCCCAGCTGAGGAGGATGTGAATAAGAAAGTGCCTGGATTGGAATTGAAGAGAAGTGGAAATGGTGGTGGTGCTTTCCAGCCATTCCACAAGGAAGAAAGAGGTGCAAAGACAAGTGAATCATTGAGTAAAGCACCCTCTTCAACCTCGGTAGCCGCCGCGAGTTCTAGCGCCGCAGAACCCGCAGCAGAAAAATCTCTGAATGAGGGACATAGAAAGCAGCGCAGGTGCTGGTCACAGGACTTGCACAAGCGCTTCTTGCATGCCCTTCAGCAGCTTGGGGGTGCAGATACTGCCACACCAAAGCAAATTAGAGAGATAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTGCAGAAATACCGTTTGCACACTAGAAGGCCAAGTCCCATGGTTCACAACAGTTCCAATCCACAAGCAGCACCTTTTGTCCTTGTAGGAAACATTTTTGTCCAATCACCAGAATATGCAGCTGTAGCTACCTCAACAGCATCAAGAGAAGTGGCCACAGTTGCAGCACCTGCTGGAATTTATGCACCAGTGGCCACACACCCTATACCTGTTTCACACCCACCAGCTGATTCAATTAAGAATCCACAGTTTAAGAAGGTACAGCTGTTTGAGCATTCAATTTCAGATGAAAGGGCTAATCACAGTGAAGGAGCTGTTCATTCAAATTCCCCTACCTCATCCTCCTCCACACATACCTCTACTTCCCTTGGCTATTGA 1152 0.4575 MYFFTEKMHSLKMGFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIEACKQQLSGTASEYNLNGHSECSEQTTSTEGPVLEEFIPIKKMASSSPFCDEEDEDDEQHSHKQRVSKENNNSDKRKSDWLRSVQLWNPDPPAEEDVNKKVPGLELKRSGNGGGAFQPFHKEERGAKTSESLSKAPSSTSVAAASSSAAEPAAEKSLNEGHRKQRRCWSQDLHKRFLHALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLHTRRPSPMVHNSSNPQAAPFVLVGNIFVQSPEYAAVATSTASREVATVAAPAGIYAPVATHPIPVSHPPADSIKNPQFKKVQLFEHSISDERANHSEGAVHSNSPTSSSSTHTSTSLGY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01968 383 MobiDBLite consensus disorder prediction 94 212 - -
Gma10g01968 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 267 IPR017930 -
Gma10g01968 383 MobiDBLite consensus disorder prediction 103 128 - -
Gma10g01968 383 MobiDBLite consensus disorder prediction 351 383 - -
Gma10g01968 383 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Gma10g01968 383 Gene3D - 209 267 - -
Gma10g01968 383 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Gma10g01968 383 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 381 - -
Gma10g01968 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677
Gma10g01968 383 MobiDBLite consensus disorder prediction 177 193 - -
Gma10g01968 383 MobiDBLite consensus disorder prediction 362 383 - -
Gma10g01968 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 381 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01968 Gma-Chr10 46939921 46942800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01968 17 324 G2-like Transcription Factor Family AT1G68670 46.970 1.89e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma10g01968 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01968 - - gmx:100796683 707.212