Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01942 ATGGCCACCGAAGACTACCCTCTCCTCGACTCTCCCTCCCACGGGCAGCCTCACCTCCACGCGTCCACGCGCCACCACTTCCCTTCCTCCTCCTCCTCCAGTCCCACCACTCTCCCCGCCACCGCCGCCTCCGGCACCGCCACCGCCGACTACTACCCCCACCCCTCCTTCTCCGACGACTCAGCCAAATCCAACTCCAAACGCGCCTCCGCCGCCGGCAGCCCCTACTACCACAACAAGAGGCTCAAATCCGCCGCCGATCCGGATCCGGCCACCGATTACCGGAAGGACCGCGAAGAATGGAGCGACACAGCGATCGCGTATCTGTTGGAGGCGTACACGGAGAAGTTCAACCAGCTGAACCGCGGCAACCTCCGCGGCCGCGACTGGGAGGAGGTGGCAGAGGCGGTGCTGGAACGATGCGGCGGAGAGGGGAAGCATCAGAAGAGCGTGGAGCAGTGTAAGAATAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTTCAGAGAATTGGGAGTGGTGGCATTGCCACTAGTCACTGGCATTGGTTTAAGAAGATTGAAGCTATTGTTGGCAACTCTCTGTCTGTGAAAACTGTTTCTGATGATGATAAGGCTGGCAGTAGTGGTGGTGGTGCTAATTCTCCTTCTATGGCTAGACAAACTAAGAACAGATATGCACCTAGCAATGCTACCGTGGCAACCAACCTCAAACCAAAGCCAGCGTCAAATCTAAAATGGCATAGAGTTTTGTTTAAAATTAGTGGCTCTGCATTGGCTGGAAACTGCCAGAACATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAGATGCATGGGTGTCTGCTACCGGGTTAGATAGACCTACGGCATACCAAATAGGTATGATGGCAACAGTTATGAATTCTATTTTGCTTCAATCTGCTTTGGAAAAGCTGGGTGTTCAAGCACGTGTTCAGAGTACATTCTCGATGCCAGAGGTTGCTGAACCATATAGCAGGCAACGAGCTATTAGACATCTTGAGAAAGGAAGGGTTGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACTTTTTACCACTGATACAGCTGCAGCTCTCAGAGCTTCTGAGCTTAATGCTGATGCGGTTCTGAAAGGTACTAATGTGAATGGCGTCTTTGACTGCCATCCCCGTAATGATAATATAACACTCGATCACATTTCCTTTAGGGAAGTTGTTTCTAGGGGCGTCACCTCCATGGACATGATGGCGCTGGCATATTGTGAAGAGAATGGAATACCTGTTGTAGTCTTCAACGTGCTTGAACCGGGGAATGTTTCAAGAGCATTATGTGGAGATCAAGTTGGCACTTTGATTGATCAAACTGGTAGAGTGGAGCATTAG 1464 0.5137 MATEDYPLLDSPSHGQPHLHASTRHHFPSSSSSSPTTLPATAASGTATADYYPHPSFSDDSAKSNSKRASAAGSPYYHNKRLKSAADPDPATDYRKDREEWSDTAIAYLLEAYTEKFNQLNRGNLRGRDWEEVAEAVLERCGGEGKHQKSVEQCKNKIDNLKKRYKVELQRIGSGGIATSHWHWFKKIEAIVGNSLSVKTVSDDDKAGSSGGGANSPSMARQTKNRYAPSNATVATNLKPKPASNLKWHRVLFKISGSALAGNCQNIDPKVAMQIAREVATACRLGVEVAIVVGGRNFFCGDAWVSATGLDRPTAYQIGMMATVMNSILLQSALEKLGVQARVQSTFSMPEVAEPYSRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADAVLKGTNVNGVFDCHPRNDNITLDHISFREVVSRGVTSMDMMALAYCEENGIPVVVFNVLEPGNVSRALCGDQVGTLIDQTGRVEH 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01942 487 Gene3D - 101 167 - -
Gma10g01942 487 PANTHER URIDYLATE KINASE 1 485 - -
Gma10g01942 487 MobiDBLite consensus disorder prediction 202 238 - -
Gma10g01942 487 Pfam Amino acid kinase family 250 459 IPR001048 -
Gma10g01942 487 MobiDBLite consensus disorder prediction 23 44 - -
Gma10g01942 487 CDD AAK_UMPK-PyrH-Ec 250 480 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gma10g01942 487 Pfam Myb/SANT-like DNA-binding domain 98 191 IPR044822 -
Gma10g01942 487 Hamap Uridylate kinase [pyrH]. 246 480 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gma10g01942 487 Gene3D - 240 486 IPR036393 -
Gma10g01942 487 PANTHER KINASE, PUTATIVE-RELATED 1 485 - -
Gma10g01942 487 MobiDBLite consensus disorder prediction 1 96 - -
Gma10g01942 487 Coils Coil 144 171 - -
Gma10g01942 487 SUPERFAMILY Carbamate kinase-like 247 479 IPR036393 -
Gma10g01942 487 MobiDBLite consensus disorder prediction 82 96 - -
Gma10g01942 487 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01942 Gma-Chr10 46657971 46661144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01942 101 202 Trihelix Transcription Factor Family AT3G14180 42.157 2.25e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma10g01942 AA_kinase 4.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01942 - - gmx:100791426 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01942 10 46657971 46661144 Gma20g01769 20 45022885 45025579 GST