Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01941 ATGGATATGCCGAAGAACCGCGCCACTCGAGCAACGTCTCTCAGAGACGCCTCCGACTCCTCTAAATTGGAAGGCACCGGTAGCTGGGACGCCATCGAATGGACCAAGATTGAGCCAATTTCCCGGTTCGTCTCGCACGCCAATCTCGATTTCTTACTCGAGTCGGAGCAAGTTGTAGCCGAAGGAAATGGTGTTGTTCTTGTTAATACAGATGATGCGGGCACGCTGATGGTAACAAATTTCCGTCTTATTTTTCTGAGCGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCTTTAACAACCATTGAGAAGTTTAACAAGACAGTTGTGAAGGTTCACTCAAATACTCGCTATGTAGACAAGACACCAGCACAGAGACTGCTCCAGGTGATTGGAAAAGATATGAGAATTTTAGTCTTCAGTTTCAGGCCACGTACAAAACAGAGACGTGTGGTTTACGAAGCGCTACTGAGGTGTACAAAGCCAACAAGACTATGGGATCTTTATGCTTTTGCATCAGGACCTTCTAGATTTAAGAACACTACTCCACTGGTGCGTTTATTGGATGAATATTTTCGACTTCTTTGCCTAGGTTCTTATCGTTCATCAATCAATATAATTGAAAATGGGTCCTTTACCTTGTCAAATGACCTATGGAGAATAAGTAGTGTGAATTGCAATTATACAATGTGCCAGAGTTATCCATTTGCTTTGGTTGTTCCAAAGATCATTAGTGATGATGAAGTGCTCCAGGCTAGTAGCTTCCGTGCAAGATGTCGACTACCTGTAGTTTCATGGTGCCATCCTTTGACTGGAGCAGTTGTTGCACGATCTTCTCAACCCTTAGTAGGTCTTATGATGAACATGAGGAGCAACATGGATGAAAAACTTGTGGCTGCACTTTGCAGCAAACTAGATAATGGTTCTAGGAGAAAGCTGTATATTGTTGATGCACGGCCTAGGAAAAATGCATTGGCTAATGGTGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGATAGTCTTTTTGGGGATAGACAACATCCATGCGATGAGAGAGAGCTTTGTTCGGCTCCGAGAATACATGGACACTCATGGCAGAACGTCATCAGATGGAATGTCCTCTTTTTTGAGACAAGGTGGGTCAACGTGGGGTGGTGGCAATCTAAGTAGTATGTCTGCTTCGGTATCAACCCTTGGGGACAGTGGATGGTTACTACATGTTCAGAATGTGTTGGCTGGTGCAGCTTGGATTGCTGCTCGTGTTGCAATGGAAAATGCTTCTGTTCTTGTGCATTGCAGTGATGGATGGGATAGGACAAGCCAGTTGGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCACAGGGTTTCAGGCACTCATTGATAAAGACTGGCTTGCTTTCGGTCATCCATTTTCTGATCGGGTGGGAATGCCATCTGTCTCTGGAACTGGCAATGTGCCTTTCGAGTTATCTAGGCAGTCTTCAACTAGCAATTTCCCACCATCACCCATGCGCCAGTCATCAGGAACCTTTGCGTTGCAACCTCCAGCTTCATCTCACTCGCATAACTCCAACAACTATTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAACTATTGCGGATGTATCCTTTTGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCGTAGACTGCATGCTTTCTTGTCGTTTTGGAAACTTCTTATGTAACAGTGAGAAGGAGAGGCAGCAATTCAATGTTTTCGAGGCATGTGGATGTCTGTGGGTATACTTGGCTGATTTGCGGACATCAGAAGGAGGTTCCCATGTGCATCACAATCCTTTTTATGATCCACCAAAGCATAATGGTCCTCTTCTGCCCCCAGCAGCAGCATTAGCCCCTACTTTGTGGCCCCAATTCCACCTTCGTTGGGCATGTCCAGAAGAAGCACAAGCTGGGGAGATTGAAGCACGATGCAGGAAGATAATTATGAAATACGCTGAGATGCAGAAGGCTAAAGAAATGGCAGAAAGGAAAGCTAAAGAAGTTACAAATTCCATGGAGTCGTTGAATGCAGAATTACGATGTGAGAAGCAGCTAAGCAGCTCAACTATGAACATGGCCAAGAGTATGAGCAAAGAAAATATGGCCATAAAGCGTGCAATTCAGTCAATGGGGTGCAAGGTTCATGTCTCTGGTAGTAGTGGTGAATGCACTGTTGACATTGAAAGCAACCCAGACATTCTGTGTTGTTCCTCTAGGAAAGAATCAAATAGTAATGTGCGTGATGACAAAAAGGATATGTCTGTTTCAGTAGTGATTACAGCAGATGATGATGATGATGATGGAAACAACACAATTGGTCGGGTATGTGAAACACTCTGCCCATTTCGCTCTGGAGATGGAGGCTGCAGATGGCCAAATGGTGGCTGTGCTCAACTAGGTAGCCAGTATGTTGGTCTGAAGGCAAATTTTGATGCATTTGACCAACTATCAATTAATGATAGTTATTTCAAGTCTGAGTGA 2553 0.4414 MDMPKNRATRATSLRDASDSSKLEGTGSWDAIEWTKIEPISRFVSHANLDFLLESEQVVAEGNGVVLVNTDDAGTLMVTNFRLIFLSEGTRKVIALGTIPLTTIEKFNKTVVKVHSNTRYVDKTPAQRLLQVIGKDMRILVFSFRPRTKQRRVVYEALLRCTKPTRLWDLYAFASGPSRFKNTTPLVRLLDEYFRLLCLGSYRSSINIIENGSFTLSNDLWRISSVNCNYTMCQSYPFALVVPKIISDDEVLQASSFRARCRLPVVSWCHPLTGAVVARSSQPLVGLMMNMRSNMDEKLVAALCSKLDNGSRRKLYIVDARPRKNALANGAMGGGSESSSNYFQSEIVFLGIDNIHAMRESFVRLREYMDTHGRTSSDGMSSFLRQGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMENASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALIDKDWLAFGHPFSDRVGMPSVSGTGNVPFELSRQSSTSNFPPSPMRQSSGTFALQPPASSHSHNSNNYSPIFLQWVDCVSQLLRMYPFAFEFSAAFLVDFVDCMLSCRFGNFLCNSEKERQQFNVFEACGCLWVYLADLRTSEGGSHVHHNPFYDPPKHNGPLLPPAAALAPTLWPQFHLRWACPEEAQAGEIEARCRKIIMKYAEMQKAKEMAERKAKEVTNSMESLNAELRCEKQLSSSTMNMAKSMSKENMAIKRAIQSMGCKVHVSGSSGECTVDIESNPDILCCSSRKESNSNVRDDKKDMSVSVVITADDDDDDGNNTIGRVCETLCPFRSGDGGCRWPNGGCAQLGSQYVGLKANFDAFDQLSINDSYFKSE 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01941 850 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 849 - -
Gma10g01941 850 Coils Coil 675 709 - -
Gma10g01941 850 PANTHER MYOTUBULARIN-RELATED 19 849 IPR030564 -
Gma10g01941 850 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Gma10g01941 850 MobiDBLite consensus disorder prediction 1 25 - -
Gma10g01941 850 SMART gram2001c 41 111 IPR004182 -
Gma10g01941 850 SUPERFAMILY PH domain-like 52 174 - -
Gma10g01941 850 MobiDBLite consensus disorder prediction 503 535 - -
Gma10g01941 850 Pfam Myotubularin-like phosphatase domain 171 592 IPR010569 -
Gma10g01941 850 MobiDBLite consensus disorder prediction 11 25 - -
Gma10g01941 850 CDD PTP-MTM-like 261 552 - -
Gma10g01941 850 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 212 654 IPR029021 -
Gma10g01941 850 Gene3D - 63 162 IPR011993 -
Gma10g01941 850 ProSiteProfiles Myotubularin phosphatase domain. 201 650 IPR010569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01941 Gma-Chr10 46642923 46657677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01941 1 848 Protein tyrosine phosphatase (PTP) family AT3G10550 67.292 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01941 K18081 - gmx:100781842 1664.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01941 10 46642923 46657677 Gma20g01770 20 45026295 45039794 GST