Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01898 ATGGGAATTGCAGTGGGAGGTGTTGATTTGCTGAGTGAAAAAGCGGCGATGATGAGAGAGTGTCTGCAGAAGAGTGAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCCTTCGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCAACTCAGATTAGAACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAGTTTTTTGGTAGTAAGAAGGGTTTCAAGAGTAGTGATGGCATTGTCGTGCATGCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCACCATTCTGAGTCTCACAACAATAATGCTGAGGCTGTTGTATACACACCTCCCGCTCTTATaccgccaagatttttgccactgctacatgatttagctcagcaaatggttgaagctggccaccaacaaccgttactcaaaatatacagGGATGCCCGTTCTCATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTGGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTCGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAACTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGCAATAAGAGAAGCTGCAACTAGTTTGACAAAACGCCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACAGATGGAACTGTCCATCCTCTAACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAGGGTGGTGAGGATTCTTCACAGCTAGCATCTGTGACAGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCGTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTACTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACTTCATCTGGTGGTGGGAGTGGTACTGCTGGTGGTGATGGTGGAACCGGAAGCAGTAGCGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACTGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTCAAACGATTTGGGCCTCTAGTGGAGAGCGGAAAGAATCCTCAGAAGTACATCAAATACTCAGCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAGGTATAA 1923 0.4072 MGIAVGGVDLLSEKAAMMRECLQKSETITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFGSKKGFKSSDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSPGHEGDPSGKNHHSESHNNNAEAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQPLLKIYRDARSHVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSAIREAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGEDSSQLASVTVRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGGTGSSSGASRAIVKDRFKSFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYSAEDLDRMLGEFFEV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01898 640 SUPERFAMILY Cullin repeat-like 77 639 IPR016159 -
Gma10g01898 640 MobiDBLite consensus disorder prediction 165 192 - -
Gma10g01898 640 Gene3D Exocyst complex component Exo70 75 640 - -
Gma10g01898 640 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 639 - -
Gma10g01898 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 639 IPR004140 GO:0000145|GO:0006887
Gma10g01898 640 Pfam Exo70 exocyst complex subunit 274 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01898 Gma-Chr10 46144046 46153203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01898 8 639 EXO70 exocyst subunit family AT5G03540 76.480 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01898 K07195 - gmx:100777735 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01898 10 46144046 46153203 Gma10g01898 10 46144046 46153203 ECH
Gma10g01898 10 46144046 46153203 Gma20g01815 20 45541907 45551773 GST