Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01894 ATGGGGTATCTGTATCTCTTGCTGCTTCTATGTTTTTCTTCCTTGTTATATGCTGCTTCTGCATTGAACTCTGATGGTTTGGCTTTGTTGTCCCTCTTGAGGGATTGGACTACTGTGCCTAGTGACATAAACTCCACATGGAGGTTGTCTGATTCCACTCCATGCTCATCTTGGGCAGGAGTGCATTGTGATAATGCCAACAATGTGGTTTCTCTAAACCTCACTAGTTATTCGATTTTGGGTCAATTAGGACCTGATCTTGGACGTTTGGTTCACTTGCAAACCATAGACTTATCATATAATGATTTCTTTGGGAAAATCCCCCCAGAATTAGAGAACTGTAGCATGCTTGAGTACTTGAACCTTTCTGTAAACAACTTTAGCGGAGGAATACCTGAGAGCTTCAAAAGCTTGCAAAATTTGAAGCATATATACCTTTTATCTAATCACCTTAATGGTGAAATTCCTGAATCCTTGTTTGAAATTTCTCACCTGGAAGAAGTGGATCTTAGCAGAAACAGTTTAACTGGTTCAATCCCCTTAAGTGTTGGGAATATCACTAAGCTTGTCACTCTGGATCTTTCTTATAATCAGTTGTCAGGGACAATTCCAATATCCATTGGAAATTGTAGTAACTTAGAGAATCTGTATTTGGAAAGGAATCAATTAGAGGGAGTTATTCCTGAGAGTCTAAATAATCTCAAAAATCTTCAAGAGTTATATCTCAATTATAATAACCTTGGAGGTACTGTTCAATTGGGATCTGGATATTGCAAAAAGTTGTCTATTTTGAGTATTTCTTACAATAACTTTAGTGGGGGTATACCATCAAGCTTGGGGAATTGTAGTGGTCTAATAGAGTTTTATGCTTCAGGGAATAACTTAGTTGGCACTATACCATCAACCTTCGGCCTCCTGCCCAACCTTTCTATGTTATTCATTCCGGAGAACCTATTGTCAGGGAAAATACCTCCACAGATTGGTAATTGCAAATCACTGAAAGAGTTGAGTTTGAATTCCAATCAACTTGAAGGAGAAATTCCAAGCGAATTAGGAAACTTGAGTAAATTGCGTGATCTTAGATTGTTTGAAAACCATTTGACAGGAGAAATTCCACTTGGCATATGGAAAATTCAAAGCCTTGAGCAGATCCATATGTACATTAATAACCTCTCGGGCGAGCTACCACTTGAGATGACAGAGCTTAAACATCTTAAGAATGTCTCCTTGTTTAACAACCAGTTCTCCGGAGTCATACCTCAAAGCTTAGGAATCAATAGCAGTTTGGTGGTGTTAGATTTTATGTATAATAATTTCACTGGTACCCTCCCACCAAATCTTTGTTTTGGAAAGCACCTGGTCAGGCTGAATATGGGTGGCAATCAATTTATTGGCAGCATACCTCCTGATGTAGGAAGGTGTACAACTCTTACAAGGTTGAGACTTGAAGATAATAATTTAACTGGGGCACTTCCTGATTTTGAAACTAATCCAAACCTCTCTTACATGAGCATCAACAACAACAATATCAGTGGAGCAATTCCATCAAGTTTGGGAAACTGCACAAATCTCTCTCTTTTAGATTTGTCCATGAACAGCTTGACGGGTCTTGTACCTTCAGAGCTAGGAAACCTTGTGAATCTTCAGACTTTGGATCTTTCTCACAATAACTTGCAAGGTCCTTTGCCACATCAGCTGTCAAACTGTGCCAAAATGATCAAGTTTAATGTCGGATTCAATTCTTTGAATGGTTCGGTTCCTTCAAGTTTTCAGAGCTGGACAACATTAACAACTTTAATTCTCTCAGAGAATCGTTTTAATGGTGGTATTCCAGCTTTCTTGTCAGAATTTAAAAAGCTCAACGAGTTACGACTTGGTGGAAATACGTTTGGAGGAAACATTCCTAGATCAATTGGAGAATTGGTGAATTTGATATATGAGCTAAATTTAAGTGCTAATGGGCTGATAGGTGAACTTCCTAGGGAGATTGGAAACCTGAAGAATCTGCTAAGCCTGGATCTATCTTGGAACAATTTGACAGGAAGTATACAAGTTCTTGATGAGCTCAGTTCATTATCTGAATTCAACATCTCATTTAATTCTTTTGAAGGTCCTGTGCCACAACAGCTAACAACATTACCAAATTCTTCTTTATCATTTTTGGGCAATCCTGGTCTGTGTGACTCGAATTTCACTGTGAGCAGCTATTTACAGCCATGTAGCACAAATTCAAAAAAGTCAAAAAAGCTGAGTAAAGTTGAAGCTGTGATGATAGCACTTGGATCCTTAGTATTTGTTGTTCTGCTGCTGGGGTTAATCTGTATATTCTTTATCAGAAAAATTAAGCAGGAAGCCATAATCATTGAGGAGGATGATTTTCCAACACTTCTTAATGAAGTAATGGAAGCGACAGAAAATCTAAATGATCAATATATTATTGGCAGAGGAGCTCAAGGAGTGGTTTACAAAGCAGCAATAGGTCCAGACAAAATTTTGGCTATAAAGAAATTTGTATTTGCTCATGATGAAGGGAAAAGCTCAAGCATGACCAGAGAAATTCAAACCATTGGAAAGATTAGGCATCGAAATTTGGTCAAATTGGAAGGGTGCTGGTTGAGAGAAAACTATGGTCTAATTGCATACAAATACATGCCAAATGGAAGCCTTCATGGTGCTTTGCATGAGAGGAATCCACCATACTCCTTAGAATGGAATGTCCGGAataggatagctcttggaattgctcatggattggcttatctccattatgactgtgatcctgtcatagtgcacagagacatcaaaaccagcaatatacttctagattctgacatggagcctcatattgcagattttggtatttccaagcttttagatcagccttctacctcaacacagtcgtcatctgttactggtacacttggatatatagcaccagAGAAATCCTATACAACAACAAAGGGTAAGGAATCTGATGTATACAGTTATGGGGTAGTTTTGCTGGAACTGATATCCAGAAAGAAGCCATTGGATGCATCATTTATGGAAGGGACGGATATAGTTAATTGGGCTAGATCTGTCTGGGAGGAAACAGGAGTTATTGACGAAATTGTTGATCCAGAGATGGCTGATGAAATTTCAAATTCTGATGTGATGAAACAAGTTGCCAAGGTGCTTTTGGTGGCTTTGAGATGCACATTAAAGGATCCACGCAAGAGACCTACGATGAGGGATGTTATCAAGCATTTGTAG 3252 0.3598 MGYLYLLLLLCFSSLLYAASALNSDGLALLSLLRDWTTVPSDINSTWRLSDSTPCSSWAGVHCDNANNVVSLNLTSYSILGQLGPDLGRLVHLQTIDLSYNDFFGKIPPELENCSMLEYLNLSVNNFSGGIPESFKSLQNLKHIYLLSNHLNGEIPESLFEISHLEEVDLSRNSLTGSIPLSVGNITKLVTLDLSYNQLSGTIPISIGNCSNLENLYLERNQLEGVIPESLNNLKNLQELYLNYNNLGGTVQLGSGYCKKLSILSISYNNFSGGIPSSLGNCSGLIEFYASGNNLVGTIPSTFGLLPNLSMLFIPENLLSGKIPPQIGNCKSLKELSLNSNQLEGEIPSELGNLSKLRDLRLFENHLTGEIPLGIWKIQSLEQIHMYINNLSGELPLEMTELKHLKNVSLFNNQFSGVIPQSLGINSSLVVLDFMYNNFTGTLPPNLCFGKHLVRLNMGGNQFIGSIPPDVGRCTTLTRLRLEDNNLTGALPDFETNPNLSYMSINNNNISGAIPSSLGNCTNLSLLDLSMNSLTGLVPSELGNLVNLQTLDLSHNNLQGPLPHQLSNCAKMIKFNVGFNSLNGSVPSSFQSWTTLTTLILSENRFNGGIPAFLSEFKKLNELRLGGNTFGGNIPRSIGELVNLIYELNLSANGLIGELPREIGNLKNLLSLDLSWNNLTGSIQVLDELSSLSEFNISFNSFEGPVPQQLTTLPNSSLSFLGNPGLCDSNFTVSSYLQPCSTNSKKSKKLSKVEAVMIALGSLVFVVLLLGLICIFFIRKIKQEAIIIEEDDFPTLLNEVMEATENLNDQYIIGRGAQGVVYKAAIGPDKILAIKKFVFAHDEGKSSSMTREIQTIGKIRHRNLVKLEGCWLRENYGLIAYKYMPNGSLHGALHERNPPYSLEWNVRNRIALGIAHGLAYLHYDCDPVIVHRDIKTSNILLDSDMEPHIADFGISKLLDQPSTSTQSSSVTGTLGYIAPEKSYTTTKGKESDVYSYGVVLLELISRKKPLDASFMEGTDIVNWARSVWEETGVIDEIVDPEMADEISNSDVMKQVAKVLLVALRCTLKDPRKRPTMRDVIKHL 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01894 1083 Gene3D Phosphorylase Kinase; domain 1 777 883 - -
Gma10g01894 1083 Pfam Leucine rich repeat N-terminal domain 23 64 IPR013210 -
Gma10g01894 1083 Pfam Leucine Rich repeat 667 681 IPR001611 GO:0005515
Gma10g01894 1083 SMART LRR_typ_2 138 162 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 330 354 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 521 544 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 666 693 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 211 233 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 545 569 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 186 210 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 234 258 IPR003591 -
Gma10g01894 1083 SMART LRR_typ_2 90 114 IPR003591 -
Gma10g01894 1083 SUPERFAMILY Protein kinase-like (PK-like) 796 1083 IPR011009 -
Gma10g01894 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Gma10g01894 1083 Gene3D Ribonuclease Inhibitor 22 299 IPR032675 -
Gma10g01894 1083 Pfam Protein kinase domain 811 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01894 1083 ProSiteProfiles Protein kinase domain profile. 807 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01894 1083 Gene3D Ribonuclease Inhibitor 400 749 IPR032675 -
Gma10g01894 1083 Pfam Leucine rich repeat 188 247 IPR001611 GO:0005515
Gma10g01894 1083 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Gma10g01894 1083 Pfam Leucine rich repeat 498 558 IPR001611 GO:0005515
Gma10g01894 1083 SUPERFAMILY RNI-like 335 699 - -
Gma10g01894 1083 Pfam Leucine Rich Repeat 92 114 IPR001611 GO:0005515
Gma10g01894 1083 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515
Gma10g01894 1083 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 3 1082 - -
Gma10g01894 1083 Gene3D Transferase(Phosphotransferase) domain 1 884 1083 - -
Gma10g01894 1083 SMART LRR_sd22_2 138 164 - -
Gma10g01894 1083 SMART LRR_sd22_2 186 218 - -
Gma10g01894 1083 SMART LRR_sd22_2 234 266 - -
Gma10g01894 1083 SMART LRR_sd22_2 666 691 - -
Gma10g01894 1083 SMART LRR_sd22_2 545 571 - -
Gma10g01894 1083 SMART LRR_sd22_2 330 356 - -
Gma10g01894 1083 PRINTS Leucine-rich repeat signature 189 202 - -
Gma10g01894 1083 PRINTS Leucine-rich repeat signature 545 558 - -
Gma10g01894 1083 SMART serkin_6 807 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01894 1083 SUPERFAMILY RNI-like 96 449 - -
Gma10g01894 1083 Gene3D Ribonuclease Inhibitor 300 399 IPR032675 -
Gma10g01894 1083 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01894 Gma-Chr10 46122666 46126220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01894 13 1083 Receptor kinase-like Gene Family AT1G73080 51.879 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma10g01894 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01894 - - gmx:100817655 2050.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01894 10 46122666 46126220 Gma20g01818 20 45571425 45574796 GST