LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma10g01891	ATGAATAGTTCAGAGGAAACCGCGCTATTGCTTGTGAGCTTTATTGTTCTAACCCTTATAATTACACTCACAGCATATGTGTGCTCTAATAACATTCCACGCACTGTTCCATCTGTGCCTGGTGGTGCCACACACTCCAACAACAACCACACTACAATCACTGTGGAGCCACCCGAGCCACGCTTAGATCACACCAATGTACGAAGCTATCCAAGTCTTCAATTCTCCAAAGCTAAATTGTGTAGTAGCAATAGTAGTAGTAGTAGCTCTTCAAGTTGTTCCATATGCTTGATGGATTACAAAGATTGTGATTCCTTGAAAGTGCTTCCTGCTTGTGGTCATTTCTTCCATGTCAAGTGTGTTGATCCTTGGTTGAGAATCAGTTTGACATGCCCGGTTTGTAGGACCCCAATAGCACTCCCAGATATATGTAAAAATTTGGAATGA	447	0.4228	MNSSEETALLLVSFIVLTLIITLTAYVCSNNIPRTVPSVPGGATHSNNNHTTITVEPPEPRLDHTNVRSYPSLQFSKAKLCSSNSSSSSSSSCSICLMDYKDCDSLKVLPACGHFFHVKCVDPWLRISLTCPVCRTPIALPDICKNLE	148

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma10g01891	148	PANTHER	RING-H2 FINGER PROTEIN ATL67	9	147	IPR044289	GO:0016567\|GO:0016740
	Gma10g01891	148	SUPERFAMILY	RING/U-box	92	141	-	-
	Gma10g01891	148	SMART	ring_2	93	134	IPR001841	-
	Gma10g01891	148	PANTHER	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	9	147	-	-
	Gma10g01891	148	Pfam	Ring finger domain	92	135	IPR001841	-
	Gma10g01891	148	MobiDBLite	consensus disorder prediction	39	55	-	-
	Gma10g01891	148	ProSiteProfiles	Zinc finger RING-type profile.	93	135	IPR001841	-
	Gma10g01891	148	MobiDBLite	consensus disorder prediction	39	61	-	-
	Gma10g01891	148	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	46	140	IPR013083	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma10g01891	Gma-Chr10	46103884	46104330	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma10g01891	12	136	C3H Transcription Factor Family	AT5G06490	34.266	5.97e-22	85.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma10g01891	-		-	gmx:102663850	295.049

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g01891	10	46103884	46104330	Gma20g01821	20	45586614	45587054	GST