Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01874 ATGGCAACAGGATCAAAGTTTTTGGACAATGCAATTATAAGAGGCCATTCTCACTTTCTCACTGCCTCTAATCATCTTCATGTATTAAAAAGTGGGGCAAACTCATCAATAGCATCATCACCTGAAAACCTTTTCTCATGTTCAAATCCTACTTCAATGAAAGAAGAGGCACCTTTAGCCACTTGGATTAGTCATATCCCTGCAAAGTTCAATGTCCATCAAGACATCAAGAATGGCAAAGAGAAAAACCAATCCAATTCTATCTTCCCAGCCTCAGACACAAAAAACAGCTCCATTCCTCTAAATCTTTTAGAAACTCTCCCACCATTAACCATAGCACCATGTTTTGATGAACCAGTAACTTCCTTAGCATCCTCTTCTGCCATACCAAAATTTCCAAACTTGACTTTGTTTTTGCAGGAACCTTCCATGGTGTACTCATCAATATCATCCTCAAATATCAAAGGTGGTGAAGTCATGTCAGCAACTTCAGACCCCTCATATCATGTGTCTCAGTTTGTCCAAAACCAGCATCAAGCAGGTAGTGGGGATGCACACAAAATGAACAAGAGCCTATCAAATTCACAGTCCAAGTCTTTCGACGAGAATTGGTTGAGTGCCACTAGGACTCAGCCTATGAAGAATGGTGGAAGAGGCAAGCTGTTTAAAGGTGTGAGGCAAAGACACTGGGGGAAATGGGTAGCTGAGATTAGATTACCAAGAAACAGGACAAGGGTTTGGCTAGGGACTTTCGACACAGCCGAAGACGCCGCCATTGCATATGACACAGCAGCATATATACTAAGAGGCGAGTATGCTCAGTTGAACTTCCCTGACCTCAAGCATGTAATTCAGGCAAATTCTCTAAATGGAACCACTGCTGCACTTGTGGAGGCAAAACTACAAGCAATATCAAAAGGTGGTTCTTCTCATAGGAAGCCAACTGATTCACCACCAGGGTCAAGCAATAAGCACAATGATGAGAATGGCAAATTGAAAAGTATAAGTGGCAAGGATTCATCCATAAGGCTTGGAGCTGAGATAACTGAGAGAAGCAAAAGCACACACCATGAGACATCAGATGTGGAAGGTGTTCATTCCTATCCCACACTGAATCTTCGGGCTCCTATTTTCCTATAA 1140 0.4228 MATGSKFLDNAIIRGHSHFLTASNHLHVLKSGANSSIASSPENLFSCSNPTSMKEEAPLATWISHIPAKFNVHQDIKNGKEKNQSNSIFPASDTKNSSIPLNLLETLPPLTIAPCFDEPVTSLASSSAIPKFPNLTLFLQEPSMVYSSISSSNIKGGEVMSATSDPSYHVSQFVQNQHQAGSGDAHKMNKSLSNSQSKSFDENWLSATRTQPMKNGGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISKGGSSHRKPTDSPPGSSNKHNDENGKLKSISGKDSSIRLGAEITERSKSTHHETSDVEGVHSYPTLNLRAPIFL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01874 379 SMART rav1_2 221 284 IPR001471 GO:0003700|GO:0006355
Gma10g01874 379 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 365 - -
Gma10g01874 379 CDD AP2 220 280 IPR001471 GO:0003700|GO:0006355
Gma10g01874 379 MobiDBLite consensus disorder prediction 177 196 - -
Gma10g01874 379 ProSiteProfiles AP2/ERF domain profile. 221 278 IPR001471 GO:0003700|GO:0006355
Gma10g01874 379 MobiDBLite consensus disorder prediction 305 336 - -
Gma10g01874 379 SUPERFAMILY DNA-binding domain 221 279 IPR016177 GO:0003677
Gma10g01874 379 PRINTS Ethylene responsive element binding protein signature 222 233 IPR001471 GO:0003700|GO:0006355
Gma10g01874 379 PRINTS Ethylene responsive element binding protein signature 244 260 IPR001471 GO:0003700|GO:0006355
Gma10g01874 379 MobiDBLite consensus disorder prediction 308 325 - -
Gma10g01874 379 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 3 365 - -
Gma10g01874 379 Pfam AP2 domain 222 270 IPR001471 GO:0003700|GO:0006355
Gma10g01874 379 Gene3D AP2/ERF domain 221 279 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01874 Gma-Chr10 45950806 45952132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01874 97 373 AP2-EREBP Transcription Factor Family AT4G13620 40.690 8.29e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma10g01874 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01874 - - gmx:100819431 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01874 10 45950806 45952132 Gma20g01835 20 45714369 45715529 GST