Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01861 ATGACTGGTAAAAGTCCAATTACTCAACGGACAGCGAGACATGGCTCACACAAACTGTGCAAATTTGATTTAGCGGATCTAGAATGGACAAATATGATTCCAGAGTGTCCAACATACCACCCATCAGAGTATGAGTTTGAGCATCCTTTAGTTTATCTGCAGAAGATTGCTCCTGAGGCTTCTAAATATGGTATATGCAAAATTGTTTCTCCAATTGCAGCCTCTAACCCAGCTGCTTTTGTCTTAATGAAAGAGAAAAAAGATTTCAAGTTTGAAACAAATGTACAGCCTCTTCGTCTTTCTAAATGGAATGAAAAGGATATAATAACCTTTTCTATGAGAGGCAGAAAATATACATATCATGACTTTGAGGTTCTTGCAAACAAGGCCTTTTTTAGTAGATTTCACAATTCTAGAGACCTTCCTTCTTCTTATGTGGAAAAGGAATTCTGGCATGAGATGGCTCATGGAGAAAAAGGAACAGTTGAGTACGGAGTCAATGTCGAAGGTAGTGCCTTTTCATGTGATCCTAATGACAGGCTTGGAACAAGCAAATGGAATTTGAAGAATTTTTCACGGCTTCCACAATCCCTGTTACGTTTAGTTGACAGGAAAATTCCCGGAATAACTGATCCTATGCTTTACATTGGGATGCTGTTCAGTATGTTTGCGTGGCATGTTGAAGATCATTATTTGTACAGCATAAACTTTCATCACTCAGGTGCAAATAAAACTTGGTATGGCGTGCCTGGCCATGCAGCATCACAATTTGAAAAGACTGTCTTACAACATGTGTATTGCAATAAGATCATAACAAAACATGGAGAGGATGGAGCTTTCAAGTTTCTAGCACAAAAAACAACCATGTTCCCACCAAACGTCATTTTACAACATGATGTGGCAGTTTACAAGGCTGTACAAAAGCCAGGAGAGTTTATCATCACCTTTCCTAGAGCATATCATGCTGGATTTAGCCATGGTTTTAACTGTGGAGAAGCAGTAAACTTTGCAAATGGTGATTGGTTTTCACTTGGGGCTGCAGCTAGCATGCGTTATACACATCTCAAAATGATGCCTTTAATTCCATATGAGGAACTTCTTTGTAAAGAGGCAATGTTGGTTTTCAAGTCCTCAAGAGTCAGAAGTTCCAAGAACAAACCTGAAGACAAAACATCTTATCAAGCTATTATGCTGCCTTTTGTGCATCTTGTGCAATCTTATAAGACCTCCCTCCTGCGACTGAACAGTTCAAGAAAGTTGCCTAGTTCTTCAAATACAACAGGTTCTCAGATATGCAGCCTTTGCTACAGGGATTGTTATGTAGCTTACTTCTTGTGCAAGTACTGCTTTTCTCATCCAATTTGTCTTTTCCATGACATTGCACCACAGACTTGTTTATGTGGAAGAGATTATACTATTTTCAAAAGGAATGACATTTTTGCACTGGAAGAAGCTGCAAAAAGTTCTCAACAGGGAAAAGAATGTGTTGACAAATTCTCTCTATCAAGTATATTCTCTTGTAGCAGAAATGATTGCATCAAAGATCCTGAAGTAAGTGAAATGTTAAACATAATTAGGTTAAGGCATTTTGATGGTTTGGCAATGACACTTCTAAATCTTTAG 1623 0.3826 MTGKSPITQRTARHGSHKLCKFDLADLEWTNMIPECPTYHPSEYEFEHPLVYLQKIAPEASKYGICKIVSPIAASNPAAFVLMKEKKDFKFETNVQPLRLSKWNEKDIITFSMRGRKYTYHDFEVLANKAFFSRFHNSRDLPSSYVEKEFWHEMAHGEKGTVEYGVNVEGSAFSCDPNDRLGTSKWNLKNFSRLPQSLLRLVDRKIPGITDPMLYIGMLFSMFAWHVEDHYLYSINFHHSGANKTWYGVPGHAASQFEKTVLQHVYCNKIITKHGEDGAFKFLAQKTTMFPPNVILQHDVAVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFANGDWFSLGAAASMRYTHLKMMPLIPYEELLCKEAMLVFKSSRVRSSKNKPEDKTSYQAIMLPFVHLVQSYKTSLLRLNSSRKLPSSSNTTGSQICSLCYRDCYVAYFLCKYCFSHPICLFHDIAPQTCLCGRDYTIFKRNDIFALEEAAKSSQQGKECVDKFSLSSIFSCSRNDCIKDPEVSEMLNIIRLRHFDGLAMTLLNL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01861 540 ProSiteProfiles JmjN domain profile. 36 77 IPR003349 -
Gma10g01861 540 PANTHER TRANSCRIPTION FACTOR JUMONJI FAMILY PROTEIN 2 522 - -
Gma10g01861 540 SUPERFAMILY Clavaminate synthase-like 183 371 - -
Gma10g01861 540 ProSiteProfiles JmjC domain profile. 183 353 IPR003347 -
Gma10g01861 540 PANTHER LYSINE-SPECIFIC DEMETHYLASE 2 522 - -
Gma10g01861 540 SMART JmjN_1 35 76 IPR003349 -
Gma10g01861 540 Gene3D Cupin 36 398 - -
Gma10g01861 540 Pfam jmjN domain 37 69 IPR003349 -
Gma10g01861 540 SMART cupin_9 183 353 IPR003347 -
Gma10g01861 540 Pfam JmjC domain, hydroxylase 213 336 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01861 Gma-Chr10 45830231 45833475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01861 19 482 JUMONJI Transcription Factor Family AT2G34880 31.471 8.44e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma10g01861 JmjC 5.1e-38 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01861 - - gmx:100809650 1038.1