Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01859 ATGGATAATACTAGCATGCTTCAAATGGTTTCAAGTTTGGTTCTGATTCTAAGTGTTTCATCATTGGCTTCAGCATCTCTGAAAGTGGGTTTCTACAGCTCCACGTGTCCATCTGCCGAGGAAATAGTGAGAAGCACAGTAAACAAAGCAATTTCAGACAACGCCGGCATAGCTGCGGGTCTCATAAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGCGATGGTTCCGTGTTACTAGCATCTACCCCAGGTAACCCAGTAGCCGAGAGAGACCATTTTGCCAACAACCCAAGCTTGCGTGGCTTCGAGGTGATTGAGGAGGCCAAGACCCAATTAGAGGCTGCATGCCCTCAAACGGTATCGTGTGCAGACATTTTGGCATTCGCAGCACGAGACAGTGCTCTCAAAGTTGGTGGCATAAACTACGACGTACCATCTGGACGCAGAGACGGACGCATCTCCATTGCTGATGAAGTGCCACGGAATCTGCCTGCCCCAACCTCCAGTGCCCATGAACTTGTTAGTAATTTTTCTCGAAAGGGCTTGTCAGCAGATGAAATGGTGACACTTTCAGGAGCGCATTCAATTGGTGTCTCGCATTGTTCTGCCTTCTCCAAGCGCTTGTACTCTTTCAATGACACAGTCACACAAGATCCCTCTATGGACTCTTCATATGCTGAAACGTTGAAAAGCAATTGTCCTGCACCACCTTCCACCATAGATTCAACAGTGTCTCTTGATCCTTCCACTCCCATTCGTTTGGACAACAAATACTATGAGGGATTGATCAACCACCGTGGCCTCCTCACATCAGATCAGACTTTGTACACCAGTCAAACCACAAGGGAAATGGTTCAAAGCAATGCCAACAATGGTGCTAGTTGGGCTGAGAAGTTTGCCAAGGCAATGGTGCAAATGGGTTCCATAGAAGTGCTTACGGGCTCCGATGTTGGGGCGTACAGGATGGGCTTGTCTGTTTTGAAGATTTGCATTACCAATGAGTTGACTGAGGGCAAGGAGCCAAAGCGAGAGAATTCGAAGGAAATGGCCACGCTTGCTATGTCCACTTTGTTGTTTGAAAGGTATATTCTCTGTGATTGTTTGCTTACCTTCATCGCGATTGAGAAGCTAGAGGGTGTTCAAGAGTTAACAAATTCTTACTTGGGTGTTAGagTTGCTGCTCTTGAAACTCAGGCTGGGCTTCATCTATTGATGAGGCAGGATGATTTGGCAGCAGCGGTTGCTGATAAGTGCATGAAGACGGTGGAGAATCAAGAAAAACCACtagaatatgagtcacgatttatagattatgaggcacaatttGTTTGTGCTAAAGCACTAAAAGGGCTAATTGGCAATGGCAATGCTGACTCAGCTGAAGATTTCTTCGACAAGTCTCTCCGTGAGAAGTATTGTGATGGTACTGCTGGTCTATCATATGCGGAATTCCTACATAAGATAGGGAACTATCAATGGCAAAGGAGTGGCTACTTTAGTACAGAGCACCATTTGACACAGGCATTAAGTAGGGCAGAGGAAGCCTATGGAGACTCTAAACATCCTAGGGTGGGGGTTGCCTTAACAAGCATTGCTCTTATGTATAGGCGTAAAGCAATTCATGAACATTCAAGTTCGCTGTTGGTTCAAGAGGGTCTCTACCGAAAAGTGATAGATATTTTGAAGGTTCCAACGACGGAAACTGAGTCTGAGGATGCCGCACCATTGGTAGATAGAAGTGATACAGCAGCTCTTGCAACAGgcgtttcacttctttacagcgcGGAGGGAGGAAGAACAAGAAGAAGAGAAGAAGGCAAATGA 1827 0.4461 MDNTSMLQMVSSLVLILSVSSLASASLKVGFYSSTCPSAEEIVRSTVNKAISDNAGIAAGLIRMHFHDCFVRGCDGSVLLASTPGNPVAERDHFANNPSLRGFEVIEEAKTQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRISIADEVPRNLPAPTSSAHELVSNFSRKGLSADEMVTLSGAHSIGVSHCSAFSKRLYSFNDTVTQDPSMDSSYAETLKSNCPAPPSTIDSTVSLDPSTPIRLDNKYYEGLINHRGLLTSDQTLYTSQTTREMVQSNANNGASWAEKFAKAMVQMGSIEVLTGSDVGAYRMGLSVLKICITNELTEGKEPKRENSKEMATLAMSTLLFERYILCDCLLTFIAIEKLEGVQELTNSYLGVRVAALETQAGLHLLMRQDDLAAAVADKCMKTVENQEKPLEYESRFIDYEAQFVCAKALKGLIGNGNADSAEDFFDKSLREKYCDGTAGLSYAEFLHKIGNYQWQRSGYFSTEHHLTQALSRAEEAYGDSKHPRVGVALTSIALMYRRKAIHEHSSSLLVQEGLYRKVIDILKVPTTETESEDAAPLVDRSDTAALATGVSLLYSAEGGRTRRREEGK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01859 608 SUPERFAMILY Heme-dependent peroxidases 27 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PANTHER PEROXIDASE 18 317 - -
Gma10g01859 608 CDD secretory_peroxidase 28 317 IPR033905 GO:0004601|GO:0042744
Gma10g01859 608 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gma10g01859 608 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PANTHER PEROXIDASE 25-RELATED 18 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 Gene3D Peroxidase, domain 2 165 307 - -
Gma10g01859 608 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gma10g01859 608 Pfam Peroxidase 43 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 Gene3D - 30 317 - -
Gma10g01859 608 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma10g01859 608 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01859 Gma-Chr10 45816791 45822122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01859 25 327 Peroxidase AT3G21770 46.382 4.00e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01859 K00430 - gmx:100815350 606.29