Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01845 ATGTTGCAGGATGTTTTTGATCAGCCACTGCCACCAAAGGCCGAACCACAACAGCAACATCCCATTGATGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTCGAACTTTGTAACACTGATTTTTTCCCAGAGACTTTGCCAAATTCTGAGGTTACTTCCAGCTCAAACTGTTGTTATGAGGAGAACTCCTCATATGCCACAACAAATATATCTGTAACTGTAGATGTAGACAATAAGTTGAATAGCAATAGCAACACAGTCACCACCCCAACTAGCACTACCACCACCAACACCAACAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCTCACTATCTCCATCTTTCAATGTTCCCCCATTTCTCCCAGCCACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAGCATCAGGTCCAACTAGCAGCATGTTCAGTTGTGGAGGGCTTCTCTCAGTATCCCAATGACTCTGTTGCACCTCCTTTTATGGGGGCTCCATTACCTTCTGTTTTTGAAGAGGACTGCATATCTTCTGTCCCTTCTTATATGGCTCTTAACCCCTCATCTCCTTGCACTTATCTCAGTCCTGGCATGCCACCATACATGCCTCATGGCCCCCTTACTACTGCCTTATCAACTGGTAGTTCTGGAATATTTGGTGGGAACATTCTTCTTGGTTCTGAACTTCAGGCACAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATTCAGCGGGTGTTTAACCCTCCAGACCTTCAGGCTCTTGGCACTGAGAGTCAGCAACTAGTACCAGGGGCTGGAAGTTCTGCCAGTCTACCAGAAATCTCAAACTTAGAGGACTCCTCCTTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGACCTCGAGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGGGAAACCAATAGAACTACAAGTAGCAATCATGAAGAAGATGATGAAGAAGAAGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCTTCCAGTCCTGGATTTGA 1251 0.4285 MLQDVFDQPLPPKAEPQQQHPIDEISSPLSARIFELCNTDFFPETLPNSEVTSSSNCCYEENSSYATTNISVTVDVDNKLNSNSNTVTTPTSTTTTNTNNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFLPATSQQEQFDFSSVQHQVQLAACSVVEGFSQYPNDSVAPPFMGAPLPSVFEEDCISSVPSYMALNPSSPCTYLSPGMPPYMPHGPLTTALSTGSSGIFGGNILLGSELQAQELEYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLVPGAGSSASLPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEEDDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSFQSWI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01845 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 22 416 - -
Gma10g01845 416 MobiDBLite consensus disorder prediction 353 375 - -
Gma10g01845 416 PANTHER CCT MOTIF FAMILY PROTEIN 22 416 - -
Gma10g01845 416 MobiDBLite consensus disorder prediction 81 106 - -
Gma10g01845 416 MobiDBLite consensus disorder prediction 1 21 - -
Gma10g01845 416 MobiDBLite consensus disorder prediction 353 383 - -
Gma10g01845 416 Pfam CCT motif 318 360 IPR010402 GO:0005515
Gma10g01845 416 ProSiteProfiles CCT domain profile. 318 360 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01845 Gma-Chr10 45708930 45712503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01845 289 367 C2C2-CO-like Transcription Factor Family AT5G24930 37.647 2.71e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma10g01845 CCT 3.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01845 - - gmx:100803778 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01845 10 45708930 45712503 Gma20g01873 20 46039352 46042830 GST