Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01844 ATGAAAATGATTTCATCTGCCTCCAACGAAAACAAGACGGTGGTGGACATGGACGACCACCTCGCCGGCCTGGGATACAAAGTCCGTTCATCGGAGCTGTGTCAAGTGGCTGCAAACATGGAGCGTTTAGAAAACGTGATTTCATCCACCGACCTATCTCAACTCGCATCAGACACAACCCTCTACGATCCTTCCAACATAGGGTTAGGTTCGTGGGTGGACACGCTCCTCTCCGAGTTCGACCAAACGGCGTCGTTACCGTTACAATACGATTTCGCCACGGATCCAAACCATAACAAGCAATTAGCGCTGGTCACCACCGTGGAAGAAGACTCGGGGATAAGACTGGTTCACATGCTGATGACGTGTGCTGATTCCGTGCAACGTGGTGACTTCTCATTCGCTGGCTCCCTCATTGAGAACATGCAGGGGTTGTTGGCGCACGTGAACACCAACTGCGGCATCGGAAAAGTCGCCGGCTACTTCATCGACGCCTTGCGCCGCCGCATCTCGAACACGCTTCCAACGTCATCATCCACTTACGAGAACGACGTTCTCTACCACAACTACTACGAAGCGTGTCCTTACTTGAAGTTCGCGCACTTCACCGCGAACCAGGCGATCTTGGAGGCCTTCAACGGCCACGATTGCGTCCACGTCATCGACTTCAACCTCATGCAAGGGCTCCAGTGGCCAGCGCTGATACAGGCACTGGCGCTCCGTCCCGGCGGACCGCCGCTGCTGAGGCTCACCGGTGTCGGGCCTCCCTCGGCGGAAAACCGCGACAATCTCCGCGAGATCGGGCTGAGACTCGCCGAGCTGGCGCGGTCCGTGAACGTGCGGTTCGCGTTCCGCGGCGTGGCGGCGTGGAGGCTGGAGGACGTGAAGCCGTGGATGTTACAGGTGAGTCTGAACGAGGCGGTGGCGGTGAACTCGATAATGCAGCTGCACCGGGTCACGGCGGTGGACGCCGCCGTGGAAGAAGTTCTCAGTTGGATCCGGAGTCTGAACCCTAAAATAGTGACGGTTGTGGAACAAGAAGCTAACCACAACGGGGAAGGGTTTTTGGAGCGGTTCACGGAGGCTTTGCATTACTATTCCACCGTCTTCGACTCGCTCGACGCGTGCCCGGTCGAACCGGACAAGGCTGCTTTGGCGGAGATGTATTTGCAGAGGGAGATATGCAACGTGGTGTGCTGTGAGGGACCGGCGCGGCTCGAGCGCCACGAGCCGCTCGCTAAGTGGAGGGATCGGCTCGGGAAAGCCGGCTTCAGACCCTTGCATTTGGGTTTCAACGCCTACAAGCAAGCCAGCATGTTGCTCACTCTGTTCTCAGCCGAGGGTTTCTGCGTCCAAGAGAATCAAGGCTCTTTGACACTGGGCTGGCATAGCCGCCCCTTAATCGCAGCTTCGGCTTGGCAAGCCGCGCCGCTGAGAGATGACGAAACGCTGCGTTTTGGGCATTGA 1467 0.5753 MKMISSASNENKTVVDMDDHLAGLGYKVRSSELCQVAANMERLENVISSTDLSQLASDTTLYDPSNIGLGSWVDTLLSEFDQTASLPLQYDFATDPNHNKQLALVTTVEEDSGIRLVHMLMTCADSVQRGDFSFAGSLIENMQGLLAHVNTNCGIGKVAGYFIDALRRRISNTLPTSSSTYENDVLYHNYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGVGPPSAENRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSLNEAVAVNSIMQLHRVTAVDAAVEEVLSWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLDACPVEPDKAALAEMYLQREICNVVCCEGPARLERHEPLAKWRDRLGKAGFRPLHLGFNAYKQASMLLTLFSAEGFCVQENQGSLTLGWHSRPLIAASAWQAAPLRDDETLRFGH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01844 488 ProSiteProfiles GRAS family profile. 107 474 IPR005202 -
Gma10g01844 488 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 478 IPR005202 -
Gma10g01844 488 Pfam GRAS domain family 116 474 IPR005202 -
Gma10g01844 488 PANTHER OS05G0574900 PROTEIN 11 478 - -
Gma10g01844 488 Pfam Transcriptional regulator DELLA protein N terminal 18 84 IPR021914 -
Gma10g01844 488 Gene3D - 16 80 IPR038088 -
Gma10g01844 488 SMART DELLA_2 18 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01844 Gma-Chr10 45706558 45708196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01844 9 474 GRAS Transcription Factor Family AT1G14920 46.615 3.55e-153 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma10g01844 GRAS 7.7e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01844 K14494 - gmx:100803245 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01844 10 45706558 45708196 Gma20g01874 20 46043338 46045283 GST