Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01828 ATGGGACCAAGCAAACATCACATTCTTCGAAGTAAAAAGGTAGCTCGCTCACACATCACAGGTCAATTTTTTGCGTTTTCTGCAACTCTGGCAAATCCTTGGTGGACAGGTCAGGGAGGGTTATCTGGGGTTGACCACCCAGGAACCCATTCACCTGGCCTAAGCAAACGCCACTCAGACCTTGGAATCAACGAAAACAGTGATAGCCACAACAATAGAGAAGAATTCGACGAAGACAATAGAGATGAACCAAAAGAGGGTGCAGTTGAGGTTGGAACCCGAAGACCAAGAGGAAGACCTCCTGGATCCAAAAACAAGCCAAAACCACCCATTTTCGTGACAAGGGACAGCCCAAATGCCCTGAGGAGCCACGTGATGGAGATAACTGGAGGAGCTGATGTTGCAGAGAGTGTTGCCCAATTCGCAAGGAGGCGTCAGCGTGGGGTTTGTGTGCTCAGTGGGAGTGGCTCAGTGGCCAATGTTACACTTAGACAGCCTTCTGCTCCTGGTGCTGTGGTGGCACTTCATGGAAGGTTTGAAATTTTGTCCCTAACCGGGACTTTCCTACCTGGTCCTGCTCCTCCAGGATCCACAGGACTCACCGTGTATCTGGCTGGAGGACAAGGCCAGGTAGTGGGAGGGAGTGTGGTTGGATCTCTAGTTGCAGCAGGACCAGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACGTATGAGAGACTTCCACTTGATGAAGATGATGAGGGGCCTAGTTCGATGGTGGGGGCGCAAGGCGGAGGAGGATCGCCACCGCTGCCACTTGGAATTGGAAGCAGTGGGGGTGGCCAGTTGCAGGGTGGGATTCCAGATCCATCATCTCTGCCTTTGTATAATCTTCCACCAAATGGAGGAGGAGGTGGCCAGGTGGGGCATGAAGCTCTTGCTTGGGCTCATGGACGAGCACCTTTCTGA 951 0.5205 MGPSKHHILRSKKVARSHITGQFFAFSATLANPWWTGQGGLSGVDHPGTHSPGLSKRHSDLGINENSDSHNNREEFDEDNRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDEDDEGPSSMVGAQGGGGSPPLPLGIGSSGGGQLQGGIPDPSSLPLYNLPPNGGGGGQVGHEALAWAHGRAPF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01828 316 MobiDBLite consensus disorder prediction 242 298 - -
Gma10g01828 316 Pfam Plants and Prokaryotes Conserved (PCC) domain 122 234 IPR005175 -
Gma10g01828 316 ProSiteProfiles PPC domain profile profile. 118 255 IPR005175 -
Gma10g01828 316 MobiDBLite consensus disorder prediction 61 93 - -
Gma10g01828 316 Gene3D - 121 248 - -
Gma10g01828 316 SUPERFAMILY AF0104/ALDC/Ptd012-like 118 246 - -
Gma10g01828 316 MobiDBLite consensus disorder prediction 41 116 - -
Gma10g01828 316 CDD DUF296 122 205 IPR005175 -
Gma10g01828 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 316 IPR014476 GO:0003680
Gma10g01828 316 PANTHER DNA-BINDING PROTEIN-LIKE 51 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01828 Gma-Chr10 45535912 45537131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01828 30 316 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.034 1.96e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01828 - - gmx:100798994 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01828 10 45535912 45537131 Gma20g01890 20 46205544 46207460 GST