Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01812 ATGTCACACTCGCCACTGGTTATTATTAGTTTTTCTTGGATGGTGGATAGTGGCCATAAGGTGGGGGATTGTAGATCggtggcttcaccaaaggaggtggctcgtaaagcggtggtttctcgaaaggaggtttgtaaatgggtggtttctcgaatggaggtttgtaaatgggtggtttctcgaatgggggttgatactctggtggtggcttctcatatggaggctgGTACAGTGGTGGAGGGTAGAATGGAGGCTTATATAATGGTGGTGGCTTTTCAGTTGGGGGAGGCTCATAGAGAGGTGATCTTAAGACTGAGAATGGAACGTGGGGTTATTGATAATATCATCAATAGGCTTCTCCAAGTGAGAGGCAGACCAGGGAAGCAGGTGCAACTTTCTGAGGCTGAGATCAAGCAGCTTTGTCTTGTCTCCAGGGATATATTTATGAGGCAGCCCAACCTCTTGGAACTCGAGGCACCAATTAAGATATGTGGAGATATCCACGGTCAATATTCCGACCTTCTGCGACTTTTTGAGTATGGTGGATTGCCTCCTCGTTATAACTACTTATTTTTAGGGGACTATGTTGATCGTGGGAAGCAAAGTTTGGAGACAATATGTCTCCTTCTGTCTTATAAAATAAAATATCCCAACAACTTTTTCCTTCTGAGGGGAAACCATGAATGTGCTTCTATAAACCGCATTTACGGATTTTATGATGAGTGTAAACGAAGGTACAATGTGAGGCTTTGGAAAGTGTTCACAGAGTGTTTCAACTGCTTGCCAGTGGCAGCTCTAATTGATGAAAAGATACTTTGTATGCATGGTGGACTCTCTCCTGAGTTACACAATTTAAATCAGATAAAGGGTTTGCCACGTCCTATTGAAGTACCTGAAACTGGTCTACTATGTGATCTCCTTTGGTCTGATCCTAGTAGTGACATTCGGGGTTGGGGAGAAAATGAACGCGGAGTTTCCTATACTTTTGGTGCTGACAGGGTGACAGAATTCCTTCAGAAGCATGATCTTGATTTGATTTGCAGGGCGCATCAGGTTGTAGAAGACGGATATGAATTCTTTGCTAACAGACAACTTGTAACTATCTTCTCGGCACCTAATTACTGTGGAGAGTTTGACAATGCTGGTGCTATGATGACTGTTGATGAGACACTTGTGTGCTCTTTTCAAATATTGAAGCCAGTAGAAAATAAAAAGCCTAGTAAGTTTGGCTTTGGGAGCACAACTACAGTTAAGCAGAGTACAACAAAAGCCAAGttatcATTTATCATTATCAACGAGGATGGACTCAAGAGTTGGGGGATTGAAGAAACAAGGGCAGCATGTTTGCAAGATTAA 1356 0.3746 MSHSPLVIISFSWMVDSGHKVGDCRSVASPKEVARKAVVSRKEVCKWVVSRMEVCKWVVSRMGVDTLVVASHMEAGTVVEGRMEAYIMVVAFQLGEAHREVILRLRMERGVIDNIINRLLQVRGRPGKQVQLSEAEIKQLCLVSRDIFMRQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPRYNYLFLGDYVDRGKQSLETICLLLSYKIKYPNNFFLLRGNHECASINRIYGFYDECKRRYNVRLWKVFTECFNCLPVAALIDEKILCMHGGLSPELHNLNQIKGLPRPIEVPETGLLCDLLWSDPSSDIRGWGENERGVSYTFGADRVTEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMTVDETLVCSFQILKPVENKKPSKFGFGSTTTVKQSTTKAKLSFIIINEDGLKSWGIEETRAACLQD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 222 246 IPR006186 GO:0016787
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 189 216 IPR006186 GO:0016787
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 285 312 IPR006186 GO:0016787
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 364 380 IPR006186 GO:0016787
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 256 282 IPR006186 GO:0016787
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 160 187 IPR006186 GO:0016787
Gma10g01812 451 PRINTS Serine/threonine phosphatase family signature 342 362 IPR006186 GO:0016787
Gma10g01812 451 Pfam Calcineurin-like phosphoesterase 160 352 IPR004843 GO:0016787
Gma10g01812 451 SUPERFAMILY Metallo-dependent phosphatases 120 403 IPR029052 -
Gma10g01812 451 Pfam Serine-threonine protein phosphatase N-terminal domain 112 158 IPR031675 -
Gma10g01812 451 ProSitePatterns Serine/threonine specific protein phosphatases signature. 223 228 IPR006186 GO:0016787
Gma10g01812 451 Gene3D - 105 411 IPR029052 -
Gma10g01812 451 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 107 425 - -
Gma10g01812 451 CDD MPP_PP1_PPKL 111 400 - -
Gma10g01812 451 Coils Coil 451 451 - -
Gma10g01812 451 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 107 425 - -
Gma10g01812 451 SMART pp2a_7 132 402 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01812 Gma-Chr10 45351052 45368047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01812 139 343 Calmodulin-binding Proteins AT5G63870 32.520 6.26e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01812 K06269 - gmx:100803420 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01812 10 45351052 45368047 Gma20g01904 20 46352105 46356938 GST