Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01793 ATGGCACATAAGAAACTACAGTGGCAGTTGCGGGAAAGCAATAGCAATACACAAAGACAACCAATCGGTCAAGACTGGAAAGTTGCTCTCAATATATCTGGATGGGATTCTCGTAACCCTCACATCAAAAGTGCTATGGCGAAACAAGGCATGTTGTCATCATTGTGTCCTAGAAAGTACCAAGTTTTTATTAGCTTCAGGGGTGAGGATGTCCGCACCAGCTTCATTAGCCATCTTCGTTCTGCTCTCTCCCGGGACAACATCAAAGCATACATGGATGACCACAACCTTCAAAAAGGAGACGAGCTTTGGCCCTCATTGTGCCAAGCAATTCAGGATTCAGAGCTTGCCATCGTCGTATTCTCCGAACACTATGCTGCTTCAAAGTGGTGCTTGAATGAGCTGGTGGAAATACTGCACTGCAGAAAATCTCAGGGCCTGGCAGTGATACCCGTGTTCTACGAAGTGGATCCATCACACATAAGGAAGTATGATGGCACTTGCGGTGAAGCAATCTCAAAATACGAGACATATTTTGGTGACAAAGACAATGAATCCATCCAAAAGTGGAAAGCTGCTCTCGCTGAAGCCGCCCATATATCTGGATGGGACTCTCATAGCCGTGAATACAAGAATGACTCTCAACTGATAGAGAAAATCGTGGTAGATGTATCCGAGAAGTTGAGCCAGGGGACCCCTTTTAAACTAAAAGTAGAAGACTTTGTTCAAATTGAAAAACATTGTGGAGAAGTCAAATTGTTGCTGTCCAAAAACCAAGATCAGTTACAAAAGAATGTTCATGTAATTGGAATTTGGGGCATGGGAGGGATTGGCAAGACAACTATTGCCAAAGCCTTGTTTTCTCAACTCTTTCCGCAATATGATGCTGTCTGCTTCTTACCAAATGTTAGAGAGGAATCAAGAAGAATTGGACTAACATCTTTACGTCATAAGCTACTTTCTGACCTACTTAAGGAAGGTCATCATGAGAGGAGGCTCAGCAATAAAAAAGTTTTGATTGTACTTGATGATGTGGATAGCTTTGATCAATTAGATGAGTTGTGTGAACCATGTAACTATGTAGGTCCAGATAGTAAAGTTATTATAACAACAAGAAATAGGCACTTACTTAGAGGAAGAGTTGATGACAGACATGTCTATGAGGTCAAGACATGGAGCTTTGCCGAATCTCTAGAGCTTTTTAGTTTGCATGCCTTCAATGAAAGACGTCCTAAAAAGGGATACGAGGATCTCTCAAACAGGGCGGTGAACTGTGCAAGGGGAGTTCCATTAGCTTTAAAAGTTTTGGGTTCTAATCTTTATTCCAGAAGTATAAAATTCTGGGACGGTGAATTGAGCAAACTTGAGAACTATCGGAATGACAGTATTCAAGATGTGTTACAAGTGAGCTATGATGGATTACATGACCTAGAGAAGAAAATATTTCTAGATATTGCATTTTTTTTTAAAGGTGAACATAAAGATGATGTCATAAGAATACTAGATGCCTGTGATTTCTACGCTACCAGTGGCATAGAGGTCCTTGAAGACAAAGCTCTTGTGACTCTTTCAAATTCTGGGATGATACAAATGCATGACTTGATACAAGAAATGGGTTTGAATATAGTTCGTGGGGGCAGTGAAGATCCCCGAAACCGTAGTCGATTGCGCGATATAGAAGAAGTTTCAGATGTACTTGAAAATAAAAATGGAAGTGATTTAATTGAAGGGATAAAATTAGATTTGTCTTCGATTGAGGATTTACACTTGAATGCTGACACATTCGACAGGATGACTAATTTAAGAATTCTAAGATTATACGTCCCTTCTGGTAAGAGATCAGGAAACGTGCACCATTCTGGCGTCCTTAGTAAATTGTCTAGTAAATTGAGGTATCTTGAGTGGAATGGATGTCGTTTGAAGTCTCTTCCAAAATCTTTTTGTGGTAAGATGCTTGTTGAGATTTGCATGCCACACAGCCATGTTACAGAACTTTGGCAGGGGGTGCAGGATCTTGCAAATTTAGTGCGAATTGACTTAAGTGAATGCAAGCACTTGAAGAATGTCCCAGACTTGTCCAAGGCGTCAAAACTTAAATGGGTGAATCTTTCTGGTTGTGAAAGTCTGTGTGATATTCATCCATCTGTTTTCTCTCTTGACACACTAGAAACTTCGACACTGGATGGCTGCAAAAATGTCAAGAGCCTTAAAAGTGAGAAACATTTAAGATCTCTGAAGGAGATCAGTGTCATTGGCTGCACTAGTCTGAAGGAATTCTGGGTGTCATCGGATTCAATCAAAGGCTTGGATTTAAGCAGCACAGGGATTGAAATGTTGGACTCTTCAATCGGGCGTCTAACAAAGCTCCGGTCACTCAATGTAGAGGGTTTGAGACATGGTAATCTTCCAAATGAGTTATTCTCCCTAAAATGTCTTCGGGAGCTTAGGATTTGCAATTGTAGACTAGCAATTGACAAAGAGAAGCTACATGTGTTATTCGACGGCTCAAGATCTCTAAGAGTACTACACTTGAAGGATTGTTGCAACCTGAGTGAGCTCCCTGAAAACATTTGGGGCTTATCAAAATTACATGAGCTAAGACTAGATGGTAGCCGTGTGAAGACACTGCCAACTACCATCAAGCATCTCAAGAGACTGAACACTCTGTCATTAAAGAATTGTAGGATGCTTGAGAGTCTGCCAAAGCTTCCCCCGAATGTCCTAGAGTTTATCGCCACGAACTGCAGATCGTTAAGGACAGTGTCAATATCAACTTTAGCAGATTTTGCATTGAGGACAGGGAAGGGCATAATCGTTTCATTGCAGAATTGTAGTAATTTATTGGAATCACCTTCTCTCCACTGCATTATGGAGGATGCTCACTTAGCAACCAAGAGTATAGTGCTTAAAAATATGTTTTTGAAAGAGTTGTTTCGAGGCACAAACACCAGAATTGATAACTATGACTATGTGAAAAGGCAGTTCAAATATCAAACAACACCATACTCCTTAGTCATTGTTGATCTTCCTTCTTCAAAATCAGACTTTGTGGGATTtgttagaaatgataTGCTTCTTTCACCCTCCCAAGAAATGAAGAACCTTTGTGTTGGCGGTGTTAAAATCTGGTGTCAGTGCTACATGGTAGATGATGCGAGGTTGGGACCCCCGCAACCACATGGCATCACGAAGCTGTCATTGGGTTGA 3207 0.4085 MAHKKLQWQLRESNSNTQRQPIGQDWKVALNISGWDSRNPHIKSAMAKQGMLSSLCPRKYQVFISFRGEDVRTSFISHLRSALSRDNIKAYMDDHNLQKGDELWPSLCQAIQDSELAIVVFSEHYAASKWCLNELVEILHCRKSQGLAVIPVFYEVDPSHIRKYDGTCGEAISKYETYFGDKDNESIQKWKAALAEAAHISGWDSHSREYKNDSQLIEKIVVDVSEKLSQGTPFKLKVEDFVQIEKHCGEVKLLLSKNQDQLQKNVHVIGIWGMGGIGKTTIAKALFSQLFPQYDAVCFLPNVREESRRIGLTSLRHKLLSDLLKEGHHERRLSNKKVLIVLDDVDSFDQLDELCEPCNYVGPDSKVIITTRNRHLLRGRVDDRHVYEVKTWSFAESLELFSLHAFNERRPKKGYEDLSNRAVNCARGVPLALKVLGSNLYSRSIKFWDGELSKLENYRNDSIQDVLQVSYDGLHDLEKKIFLDIAFFFKGEHKDDVIRILDACDFYATSGIEVLEDKALVTLSNSGMIQMHDLIQEMGLNIVRGGSEDPRNRSRLRDIEEVSDVLENKNGSDLIEGIKLDLSSIEDLHLNADTFDRMTNLRILRLYVPSGKRSGNVHHSGVLSKLSSKLRYLEWNGCRLKSLPKSFCGKMLVEICMPHSHVTELWQGVQDLANLVRIDLSECKHLKNVPDLSKASKLKWVNLSGCESLCDIHPSVFSLDTLETSTLDGCKNVKSLKSEKHLRSLKEISVIGCTSLKEFWVSSDSIKGLDLSSTGIEMLDSSIGRLTKLRSLNVEGLRHGNLPNELFSLKCLRELRICNCRLAIDKEKLHVLFDGSRSLRVLHLKDCCNLSELPENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLNTLSLKNCRMLESLPKLPPNVLEFIATNCRSLRTVSISTLADFALRTGKGIIVSLQNCSNLLESPSLHCIMEDAHLATKSIVLKNMFLKELFRGTNTRIDNYDYVKRQFKYQTTPYSLVIVDLPSSKSDFVGFVRNDMLLSPSQEMKNLCVGGVKIWCQCYMVDDARLGPPQPHGITKLSLG 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01793 1068 SUPERFAMILY Toll/Interleukin receptor TIR domain 55 203 IPR035897 -
Gma10g01793 1068 SMART AAA_5 265 391 IPR003593 -
Gma10g01793 1068 Gene3D - 393 475 IPR042197 -
Gma10g01793 1068 SUPERFAMILY L domain-like 530 926 - -
Gma10g01793 1068 Pfam NB-ARC domain 245 471 IPR002182 GO:0043531
Gma10g01793 1068 Gene3D - 230 385 IPR027417 -
Gma10g01793 1068 ProSiteProfiles TIR domain profile. 58 228 IPR000157 GO:0007165
Gma10g01793 1068 PANTHER NB-ARC DOMAIN PROTEIN 58 994 - -
Gma10g01793 1068 PRINTS Disease resistance protein signature 332 346 - -
Gma10g01793 1068 PRINTS Disease resistance protein signature 268 283 - -
Gma10g01793 1068 PRINTS Disease resistance protein signature 670 686 - -
Gma10g01793 1068 PRINTS Disease resistance protein signature 426 440 - -
Gma10g01793 1068 Gene3D - 57 229 IPR035897 -
Gma10g01793 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 485 IPR027417 -
Gma10g01793 1068 SMART till_3 59 200 IPR000157 GO:0007165
Gma10g01793 1068 Pfam TIR domain 59 240 IPR000157 GO:0007165
Gma10g01793 1068 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 994 IPR044974 GO:0006952
Gma10g01793 1068 Gene3D Ribonuclease Inhibitor 550 764 IPR032675 -
Gma10g01793 1068 Gene3D Ribonuclease Inhibitor 765 968 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01793 Gma-Chr10 45138742 45145036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01793 58 872 WRKY Transcription Factor Family AT4G12020 32.342 1.42e-94 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01793 - - gsj:114371786 1965.27