Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01773 ATGAGATTTCAAGTATCATCATTGAACCACGTTTGGTTTACTGTTAGGGATTTATCTCTAGAATTCATCAATGACTCGAGAGTCACGAACTTGTGTTTCATTTCATTCACTATACGATTTTCTGTAAAGTCTGATGAAACAATAGGGGAAAACATGGGATTCtATCTTAATCTCAAACGCAAGGCGTTCCGGCTTAAACGGTTTCTGCTAGGACATGAAGGCAGAAAAAGAAAATACAAGCAGGCAAAAAAACCTTCATGGATGAGGCCAATGACATATGGTTATCAAGTGGTGGAGAGTAATATGGCCAGAGATGGTTCTGATGACTCTGATTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGGATCAAACAGAATTGTGGTATTTTGGAATCTTTGACGCACTAATTGGAGACAAAGTTACCAAGTACATGCAGTCTTATTTCTTTGACAAGATGCTTCAAGAGACTCATATAAGGAGAAAAAGCAAGGAAGCTCTGAAGAGAGCTTACCTTGGTGTAAGAGCAATGATCCGAGAGCAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATGTTGATCGATGGAGAAAAACTTGTGGTAGCCAACATGGGAGATTACAGAATTGTTGTCTGCAGAGATGGCATAGCTCATCAGACAACTGGCACATACCTACAATCAGCGAAAATACATTGGTCTCGCAGATTCTTCGCAGCATGTCAATCAGGAAATGCAGCAGGGGCAAAGCATTCTAGAGGCTCTGATCTTTCCGTTAGAAGTGAAAGGATTGATTCTGATACTGAGTTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATAAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTCTAATTAGGATGAGCAAAAGCAGCATCTCATGCTTAATCATTCGCTTTGACTGA 987 0.4063 MRFQVSSLNHVWFTVRDLSLEFINDSRVTNLCFISFTIRFSVKSDETIGENMGFYLNLKRKAFRLKRFLLGHEGRKRKYKQAKKPSWMRPMTYGYQVVESNMARDGSDDSDFDSVVAQREEMDQTELWYFGIFDALIGDKVTKYMQSYFFDKMLQETHIRRKSKEALKRAYLGVRAMIREQHKLEETCRMGSASVMLIDGEKLVVANMGDYRIVVCRDGIAHQTTGTYLQSAKIHWSRRFFAACQSGNAAGAKHSRGSDLSVRSERIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSKSSISCLIIRFD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01773 328 SMART PP2C_4 99 325 IPR001932 -
Gma10g01773 328 Gene3D - 257 328 IPR036457 -
Gma10g01773 328 CDD PP2Cc 129 327 IPR001932 -
Gma10g01773 328 PANTHER ALPHABET, ISOFORM E-RELATED 56 327 - -
Gma10g01773 328 SUPERFAMILY PP2C-like 115 328 IPR036457 -
Gma10g01773 328 Gene3D - 72 227 IPR036457 -
Gma10g01773 328 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 56 327 - -
Gma10g01773 328 ProSiteProfiles PPM-type phosphatase domain profile. 109 327 IPR001932 -
Gma10g01773 328 Pfam Protein phosphatase 2C 97 224 IPR001932 -
Gma10g01773 328 Pfam Protein phosphatase 2C 264 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01773 Gma-Chr10 44953185 44958404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01773 52 327 PP2C-type Phosphatase Gene Family AT3G23360 47.482 3.61e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01773 K19704 - gmx:100785227 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01773 10 44953185 44958404 Gma10g01773 10 44953185 44958404 ECH
Gma10g01773 10 44953185 44958404 Gma20g01941 20 46688861 46690784 GST