Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01770 ATGCCCATGAATATGAACAACATTTTTAACAATAGCAATCAGCCAAGTTTTTTCAACTCTGGACAAGACCCTCACCAGAACAACCAAAATGGTTTTAGGTGTAGATTGTGCAACCATGTTTTCCCTAGCTACCAAGCACTCAAAGCCCATTTTGAGTCTCATTTTACTCTAGAAAACCCTGCCATTAGAAATCTATTTTCATCAAGTCATGCCAACTCTCAAAGAGAAATGATTCCCAACCCTTTGCAGCCCAATTTTCCCAGGCCAATGGTGATGCAGGAAACAAGAAACTTTGTCAACAGGAATTTCCAGGCACCACCACAACAACCTATGGTCATGCCTCAATATAGAGCAAACCTATTTCCTTGTGCTATCCAGCATAATGTTGCTGCTTCACAACCACTTCAAGGTCCACCAGAGCCACAGGCTACACAATTTGTCAATAATAATGTTGAAATGGCTCAATTGCTTGCTCCACCAGCAATCCACCAAATGGAGATGGAGGTTTCTCCAATTGATGGAACTAAGCCATATATCGATCTACTGGATAAACCCATCAACAACAATTGA 570 0.4123 MPMNMNNIFNNSNQPSFFNSGQDPHQNNQNGFRCRLCNHVFPSYQALKAHFESHFTLENPAIRNLFSSSHANSQREMIPNPLQPNFPRPMVMQETRNFVNRNFQAPPQQPMVMPQYRANLFPCAIQHNVAASQPLQGPPEPQATQFVNNNVEMAQLLAPPAIHQMEMEVSPIDGTKPYIDLLDKPINNN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01770 189 SUPERFAMILY beta-beta-alpha zinc fingers 19 54 IPR036236 -
Gma10g01770 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 54 IPR013087 -
Gma10g01770 189 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Gma10g01770 189 SMART c2h2final6 32 54 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01770 Gma-Chr10 44931466 44932035 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma10g01770 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01770 - K09228 pvu:PHAVU_007G056300g 187.963