Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01768 ATGGATGTGGAGGAAACTGAGGAGTTGGTGGTGTCTTTGGACCCAGATTTGTTGCAGCTTCCGGAGGTGTCTCCTTTTGCACTGAAATCGAGTCCTTATGTTGTTGAGGAGCTATTCACACAGTGGCTTTCGCTTCCAGATACTTGTCGCCTGGTTAAGTCATTGCTTGCTGATGCAAAGGCAGGAGCTCCTTTGAATGCACTTGAGAACTCAACAAATACAAATGCTCTGTCAATCAACTCTCTACCTTCCTTGTTTCCTGCTGGGAGTACACCACCACTTTCACCGCGCAGTTCATCTGGTTCCCCACGTACCACAAAACAGAGAAATAGTCCTTCATTAGGATCTCCACTAAAATTAGCCAGTGAGCCTGTAAGGGAGAGGGAGGTCATTCCACAGTTCTACTTCAAAAATGGTCGTCCACCTCCAAGTGAAATGAAAGAGCATTTCCTATATCAAATTGATAGTCGATTTTATGGTCATTTGGATGGTCTACAATTACATGAATTTAAGTCTTTTACAAAAGAGCTCTGCAAACTTCCATCATTTTTCTCCACTGCCCTTTTCAAAAAGATTGATGTCAATTTTACTGGAACCATATCAAGGGATCAATTTATAGACTATTGGATTCGGGGTAATATGCTAGCTATGGATTTACCCACACAAATATATACCATACTGAAGCAACCATATCGAGCATACCTTGTACAGGATGATTTCAAACCTGTCCTGAGGGAACTATTGTCCACTCATCCTGGATTGGAGTTTTTGCAAAGCACGCCTGAATTTCAGGAAAGATATGCTGAGACTGTCATACATAGAATATTTTACTACATGAATAGATCAGGAAATGGCCGACTTACACTAAGGGAATTGAAACGTGGGAACCTAATTGATGCAATGCTACATGTAGATGAGGAAGAGGATATTAATAAAGTACTGAGGTACTTCTCATATGAGCATTTTTATGTCATTTACTGCAAATTTTGGGAGCTCGACACAGATCATGACTTTTTCATTGATAGAGAGAACCTTATTAAATATGGGAACCATTCTCTTACCTATCGGATTGTTGATAGAATTTTTTCTCAGGTTCCAAGGAAATTTACCAGTAAAATTGAAGGGAAGATGAACTATGAAGATTTTGTTTATTTTATACTTGCTGAGGAAGATAAGTCATCGGAACCTAGTCTCGTATACTGGTTCAAATGCATTGATTTGGATGGAAATGGAGTGCTGACACCAAATGAAATGCAGTTCTTTTATGAGGAGCAGTTGCATCGGATGGAGTGCATGGCCCAAGAGCCTGTGCTGTTTGAAGATATATTGTGTCAGATTGTGGATATGATTGGACCAGAGAATGAGGGATATATCACAATACGAGATGTTAAAGGCAGCAAACTTTCTGGAAATGTTTTCAATATTCTTTTCAATCTCAACAAGTTTATTGCTTTCGAGACTCGTGATCCATTTCTCATACGTCAGGAACGTGAGGATCCAAATTTGACAGAGTGGGATCGTTTTGCACATAGAGAGTATATTAGGCTTTCCATGGAAGAAGATGGCCCCTTTCTGAGGTTAATTAAGATGAATCAAAGGCTATGGATTCCAGTCACTGAATATGCAAGCAGTATAATATTTGATGAGGCCATGTTGCGCAACAACATTCCTTTTCTCCACTTCGAAGCAACGCAACATTCTCTCTTTGCGAGGTTGAAGTCGTCGTCTTTCGATATCCGCCCTAACTCTTTAGATGACTTGGCAACGGGAGCACAAGGAATCATTCTAGTGGGATTGGATGACTCCAAATTCAAACAGAGTCTGTTAGTCAAGGATCTCACCATGCAAACGACATTGTTTAGTCATCCTCTATTCTGTTTCTCTTGCAGAAACATCAGTACAAATGGGAAGACTAAGTGCTCTGTAAAATTTCGTACATCATACCCCTCTCAACTGGATCGGAAATGTGAATTCAATGGGATACCTCATGTTTATAATTCTCCCAGCCCCATAAAACCAAACAGATTGTTTGTGCTTCATAACACAGGTGACAGCCATCTATCTGCTTTTACGGTAGATGATGAAATGAACACAAACCATGCTCCAAATGGCACATCACCAACATTTCTCAGCAACTGGTCACCTCCAAGGTACCTGTGGAGGGGGTTGTCAGTTTTAATCCTGGCAGGGCAGGTGATTGTCAAGACTCTAAAGGGAAAGATTCATTGGAGGAACACTCTTCAACAACTGGAGAGAGTTGGTCCTAAATCAGTTGGAGTGTGTCTTTTAACTTCAGCTTTTGTGGGCATGGCCTTCACGATTCAATTTGTAAGAGAGTTCACCAGGTTGGGATTGAATAGATCGGTAGGTGGGGTTTTAGCTCTGGCTTTCTCAAGGGAGCTAAGTCCTGTGGTTACAGCAATTGTGGTTGCAGGGCGCATTGGAAGTGCTTTTGCAGCTGAGTTAGGAACTATGCAGGTTTCTGAGCAAACTGATACATTAAGAGTTCTTGGTTCAGACCCTGTTGATTATCTGGTGACACCAAGAGTGTTAGCCACTTGTATTGCGTTACCCCTTTTGACCCTGTTGTGTTTTACATTAGGGATGGCATCTAGTGCCCTTCTTGCTGATGGTGTTTATGGGGTGAGCATCAACATTATCTTGGATTCAGCTCAGCGAGCTCTCAGATCATGGGATATTATTAGTGCAATGATCAAGTCACAGGTTTTTGGTGCTATCATATCTATTGTGAGTTGTGCATGGGGAGTAACAACTTTGGGAGGTGCTAAAGGTGTTGGAGAATCAACAACGTCAGCTGTGGTTATTTCTCTTGTCGGCGTGTTCATTGCTGATTTTGCTCTTTCTTATGTTTTCTTCCAAGGAGCAGGAGATCAGCTAAAGAATTGCATTTAA 2913 0.4137 MDVEETEELVVSLDPDLLQLPEVSPFALKSSPYVVEELFTQWLSLPDTCRLVKSLLADAKAGAPLNALENSTNTNALSINSLPSLFPAGSTPPLSPRSSSGSPRTTKQRNSPSLGSPLKLASEPVREREVIPQFYFKNGRPPPSEMKEHFLYQIDSRFYGHLDGLQLHEFKSFTKELCKLPSFFSTALFKKIDVNFTGTISRDQFIDYWIRGNMLAMDLPTQIYTILKQPYRAYLVQDDFKPVLRELLSTHPGLEFLQSTPEFQERYAETVIHRIFYYMNRSGNGRLTLRELKRGNLIDAMLHVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIKYGNHSLTYRIVDRIFSQVPRKFTSKIEGKMNYEDFVYFILAEEDKSSEPSLVYWFKCIDLDGNGVLTPNEMQFFYEEQLHRMECMAQEPVLFEDILCQIVDMIGPENEGYITIRDVKGSKLSGNVFNILFNLNKFIAFETRDPFLIRQEREDPNLTEWDRFAHREYIRLSMEEDGPFLRLIKMNQRLWIPVTEYASSIIFDEAMLRNNIPFLHFEATQHSLFARLKSSSFDIRPNSLDDLATGAQGIILVGLDDSKFKQSLLVKDLTMQTTLFSHPLFCFSCRNISTNGKTKCSVKFRTSYPSQLDRKCEFNGIPHVYNSPSPIKPNRLFVLHNTGDSHLSAFTVDDEMNTNHAPNGTSPTFLSNWSPPRYLWRGLSVLILAGQVIVKTLKGKIHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGSDPVDYLVTPRVLATCIALPLLTLLCFTLGMASSALLADGVYGVSINIILDSAQRALRSWDIISAMIKSQVFGAIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVGVFIADFALSYVFFQGAGDQLKNCI 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01768 970 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Gma10g01768 970 Gene3D - 317 488 - -
Gma10g01768 970 SUPERFAMILY EF-hand 306 461 IPR011992 -
Gma10g01768 970 MobiDBLite consensus disorder prediction 88 117 - -
Gma10g01768 970 Gene3D - 127 227 - -
Gma10g01768 970 MobiDBLite consensus disorder prediction 88 124 - -
Gma10g01768 970 PANTHER PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED 4 522 - -
Gma10g01768 970 Gene3D - 229 316 - -
Gma10g01768 970 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Gma10g01768 970 SUPERFAMILY EF-hand 164 295 IPR011992 -
Gma10g01768 970 Pfam Permease MlaE 747 956 IPR030802 GO:0043190
Gma10g01768 970 Pfam EF-hand domain 221 307 IPR041534 -
Gma10g01768 970 TIGRFAM TIGR00056: ABC transport permease subunit 724 961 IPR003453 -
Gma10g01768 970 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 4 522 - -
Gma10g01768 970 Pfam EF-hand domain pair 322 422 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01768 Gma-Chr10 44896402 44913728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01768 10 521 EF-hand Containing Proteins AT5G28850 74.805 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01768 K11583 - gmx:100793000 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01768 10 44896402 44913728 Gma20g01747 20 44780008 44781827 GST
Gma10g01768 10 44896402 44913728 Gma20g01946 20 46733465 46734633 GST