Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma10g01767 | ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTACTTAGGTGTTAATGTGCAAAGTGGGGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAAACCAAGCACCCACAGCTTCACTATGAGTCTAAACTGTATATGCTTCTTCAAGGGGGAACTGGTATACCCCATCTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGAAAATTATCCCTGAAAACAGTTCTGATGCTGGCAGATCAGCTAATAAACAGAGTTGAGTACATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGCTTAGGCCGCAAGGCAAATCAGGTATACATAATTGATTATGGCCTGGCAAAAAAGTATCGGGATCTTCAAACTCACAAGCATATTCCATACAGGGAAAACAAAAATCTCACTGGAACTGCTCGGTATGCAAGTGTTAATACTCATCTGGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCTCTCGGATATGTGCTCATGTATTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAGAGCTGGCACCAAAAAGCAAAAATATGACAAGATAAGTGAGAAGAAGATGCTTACTCCAATAGAGGTCTTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTACTGCCGATCATTGCGGTTTGAAGATAAGCCTGATTATTCTTATCTTAAGAGACTCTTTCGGGACCTATTTATCCGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATGCTGAAGTATCCTCAAATTGGATCCAGTTCTAGAGCCCGACCAAGTGGGAAACCAGTCATAAACCCAGGACAATCAGGGGAGAGAATAGAACGGCCTTCAGGCTTTCATCAGCAAAAGATTTTTACCTATGTTTTCGGGGGTTTCTCAGGTGCAGTTGAGGCATTTGCAAGGAGGAATGGCTCTGGACTTGTTCTACATAGTGAGCTTTCTAGGCATAAGTCTTCAGATGATGTGCCATCTTCCAAAGACGTGCAAGCTAATTCTGAGAGGCCTCGCAGCTCTTCTCGTAATGGCAGTTCTTCAAAAAAGCCTGTCTTGTCTAGCAGCCGGCCAAGCTCTTCTGGTGAGCCTAGTGAAAGCCGTTCTAGCCGACTGGTCTTAAGCAGTGGCCGACTATCAACAACTCAGAGACTTCAACCTGGTTTTGAATCCAAAACATCTTTATCACGGGCTTCAGCAACAAGAGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCACTTGGTTCAGGAAAAAGGAAATGA | 1407 | 0.4314 | MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGTKKQKYDKISEKKMLTPIEVLCKSYPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKPVINPGQSGERIERPSGFHQQKIFTYVFGGFSGAVEAFARRNGSGLVLHSELSRHKSSDDVPSSKDVQANSERPRSSSRNGSSSKKPVLSSSRPSSSGEPSESRSSRLVLSSGRLSTTQRLQPGFESKTSLSRASATRGGRDDTLRSFELLSLGSGKRK | 468 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma10g01767 | 468 | MobiDBLite | consensus disorder prediction | 372 | 446 | - | - | |
Gma10g01767 | 468 | Pfam | Protein kinase domain | 10 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma10g01767 | 468 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Gma10g01767 | 468 | ProSiteProfiles | Protein kinase domain profile. | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma10g01767 | 468 | PANTHER | CASEIN KINASE-RELATED | 1 | 455 | - | - | |
Gma10g01767 | 468 | MobiDBLite | consensus disorder prediction | 299 | 323 | - | - | |
Gma10g01767 | 468 | MobiDBLite | consensus disorder prediction | 362 | 452 | - | - | |
Gma10g01767 | 468 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 290 | IPR011009 | - | |
Gma10g01767 | 468 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Gma10g01767 | 468 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 323 | - | - | |
Gma10g01767 | 468 | PANTHER | CASEIN KINASE I-LIKE PROTEIN | 1 | 455 | - | - | |
Gma10g01767 | 468 | SMART | serkin_6 | 9 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma10g01767 | 468 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma10g01767 | Gma-Chr10 | 44886147 | 44891778 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma10g01767 | 8 | 213 | MAP Kinase Kinase Kinase | AT3G06030 | 25.463 | 1.13e-13 | 71.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Gma10g01767 | Pkinase | 4.3e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma10g01767 | K08960 | - | gmx:100804897 | 823.157 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g01767 | 10 | 44886147 | 44891778 | Gma10g01767 | 10 | 44886147 | 44891778 | ECH |