Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01734 ATGGAGGGAAGAGAGAATTTTGGTGTTGTGGTGGGTGATGAGGCTCCAGAGAGCTTCCATGTGGCTCCTAGAATTGAGAACAACTTGGACTTTTCAAGGGCGACCGTGCCGGCGCCGGCGCCACCGACGGAGGGAAAAAAGAAGAGAGGGAGGCCGAGGAAGTATGGGCCGGATGGGAAGCCGGCGTTGGGAGCGGTGACGGCGCTTTCGCCGATGCCGATTTCGTCGTCGATTCCGTTGACGGGCGAGTTTTCTGCTTGGAAGAGGGGTAGAGGGAGGCCTGTTGAATCTATCAAGAAGTCATCGTTTAAGTTTGAGGTTGAAAGCCCAGGACCAGGCGAGGGAATAGCATACTCAGTTGGTGCCAATTTCACACCACATGTGCTCACAGTAAATGCGGGCGAGGATGTCACTATGAAGATTATGTCCTTCTCTCAACAAGGATCACGTGCTATATGCATTCTATCAGCAACGGGGACAATTTCAAATGTTACACTTCGTCAACCGTCTTCTTGTGGTGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGAGTTACCAGAAGCAGATCTGGAGGGATGAGTGTCTCTTTGGCTGGTCCAGATGGTCGAGTAATGGGGGGCGGACTTGCTGGTTTGTTGGTAGCTGCTGGTCCAGTGCAGGTTGTGGTGGCCAGTTTTCTTCCTGGTCACCAGTTGGAGCATAAAACCAAGAAGCAAAGGGTGGGGCATGTATCAACTATTAGCCCTTCACCTGTTAATCTTATCACTAGTGAGGAAATAATAGTCAGTTTCGGTGGAGTAAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAATATTGCTTCTTTTAACAATGGTCAAGACTATAGAAACTCATCAGTTGATGACAAAGATCCTTTGCCTGAAAAGGAGTCTAACCTAAGCCAATCAAATGCTGAGGCTGTATGCTAA 993 0.4844 MEGRENFGVVVGDEAPESFHVAPRIENNLDFSRATVPAPAPPTEGKKKRGRPRKYGPDGKPALGAVTALSPMPISSSIPLTGEFSAWKRGRGRPVESIKKSSFKFEVESPGPGEGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGSRAICILSATGTISNVTLRQPSSCGGTLTYEGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEHKTKKQRVGHVSTISPSPVNLITSEEIIVSFGGVKPIMTPAAFQEENIASFNNGQDYRNSSVDDKDPLPEKESNLSQSNAEAVC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01734 330 MobiDBLite consensus disorder prediction 30 61 - -
Gma10g01734 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 239 IPR005175 -
Gma10g01734 330 ProSiteProfiles PPC domain profile profile. 121 262 IPR005175 -
Gma10g01734 330 MobiDBLite consensus disorder prediction 299 330 - -
Gma10g01734 330 CDD DUF296 125 239 IPR005175 -
Gma10g01734 330 SMART AT_hook_2 46 58 IPR017956 GO:0003677
Gma10g01734 330 SMART AT_hook_2 88 100 IPR017956 GO:0003677
Gma10g01734 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 318 IPR039605 GO:0003680
Gma10g01734 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 242 - -
Gma10g01734 330 Gene3D - 126 258 - -
Gma10g01734 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 9 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01734 Gma-Chr10 44503251 44510813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01734 46 314 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 57.951 1.28e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01734 - - gmx:100776862 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01734 10 44503251 44510813 Gma10g01734 10 44503251 44510813 ECH
Gma16g01666 16 37694387 37699603 Gma10g01734 10 44503251 44510813 PCT
Gma09g01470 09 39377744 39382668 Gma10g01734 10 44503251 44510813 PCT
Gma10g01734 10 44503251 44510813 Gma16g01666 16 37694387 37699603 PCT
Gma10g01734 10 44503251 44510813 Gma09g01470 09 39377744 39382668 PCT