Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01728 ATGGAGTTTTCAGTACTACCACTTTTGTATTCTCTTGTGTTTCTTCTCTCAAACCCAACATGGGTGTGTGGGAATGGAGAGTTGAGAGCACTGATGGATATGAAGGCCAGTTTGGACCCAGAGAGCCTCTATCTACCCTCTTGGAGTATCAATGGTGACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGAGAAGGGTCAGGTGGCAAACATTTCTCTGCAGGGAAAGGGTCTCTTTGGGAAGCTTTCAGCAGCCATTGCTGGCCTAAAGCACTTGACTGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCAAGAGAGATTGCAAACTTGACTGAGCTTGTTGATTTGTATTTGAATGTGAATAATCTGTCCGGGGAAATCCCTCGTAAGATCGCCAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCAGTTGACAGGAAGCATTCCTACACAGCTTGGTGCTTTGGAAAAGCTGAGAGTTGTTGCTTTGCAGTCTAACAATTTAACTGGTGCCATCCCTGCTAATCTAGGTGAATTGGGTATGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGATGCTCCTTCACTGAAGGTTTTGGATGTTCACAACAATACCCTTTCTGGGAATGTACCTCCTGCTCTTAAGAGACTAGATGATGGATTTCTGTATGAATACAATCTGGGGTTATGTGGAGTTGGGTTTTCATCCCTGAAAGCTTGCAATGCTTCGGATCATGTTAATCCTAGCAGACCTGAACCTTATGGAGCAGCCACAAGAGATATCCCAGAAACTGCTAATGTGAAGTTACCTTGCAGGGGAGCTCAGTGCCTTAATTCATCAAAATCCAATCAATCCACATCAATTACAGTTAGCATATTTGTGGTTATGATTGCACTGTGTGCAATTGGTGTTTTGACATTCACAATATATCGTCGAAGAAAACAAAAGCTTGGAGATTCTTTTCATATCAGTGACAGTCATCTAAGCACTGATGAAGCCATTGGTGCATATAGGAAAAATGGATCTCCTTTGGTCAGTCTTGAGTACTCTACTGGATGGGACCCTTTGGCTGATAGTAGGAATTTCAATGGCTATAGTCAAGAGATGTTCCAGAGTTTGAGGTTCAACTTGGAGGAAGTGGAGTCAGCTACTCAGTATTTCTCAGAGTTGAATCTGTTGGGTAAGAATAGCTTTAGTGCAACTTATAGAGGAGTTTTAAGAGATGGATCTGTTGTTGCTGTGAAGAGCATCAGCAAAACTAGTTGCAAGTCGGATGAAGGCGAGTTTATGAAGGGATTGCACATGTTGACCTCACTGAGGAGTGATAATGTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGCGAATGCTTTCTGATTTATGATTTTGTTCCTAATGGAAACCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTGCATGCATACAAAGCAAACAAGCCCGTTTTGGTTCACCAAAACATCTCAGCTGACAAAGTTCTCATTGATCAACGGTACAATCCATTGCTAGCAGATTCTGGCCTGTACAAGCTTCTCACTAACGATATTGTCTTCTCTGCACTCAAGGGAAGTGCAGCAAAGGGTTACTTGGCGCCTGAATACGCCACAACTGGCCGCTTTTCTGAGACAAGCGATGTTTATGCTTTTGGGGTGATGCTTTTCCAGATCCTTTCAGGGAAGCACGAGATTACTAGCTCAATAAGACTTGCTGCAGAGTCCTCCAAGTTCCAAGAATTTATGGACCCAAATCTCCATGGAAGATACTTCGAATATGAAGCAGCTAAACTGGCAAAGATAGCTTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGGCCATCCATGGAAGGCATTGTTCAAGAACTGGGGAATTGTAGTAGCTGTTTCTGA 2034 0.4292 MEFSVLPLLYSLVFLLSNPTWVCGNGELRALMDMKASLDPESLYLPSWSINGDPCDGSFEGVACNEKGQVANISLQGKGLFGKLSAAIAGLKHLTGLYLHYNSLYGEIPREIANLTELVDLYLNVNNLSGEIPRKIASMENLQVLQLCYNQLTGSIPTQLGALEKLRVVALQSNNLTGAIPANLGELGMLVRLDLSSNNLFGSIPTSLADAPSLKVLDVHNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKACNASDHVNPSRPEPYGAATRDIPETANVKLPCRGAQCLNSSKSNQSTSITVSIFVVMIALCAIGVLTFTIYRRRKQKLGDSFHISDSHLSTDEAIGAYRKNGSPLVSLEYSTGWDPLADSRNFNGYSQEMFQSLRFNLEEVESATQYFSELNLLGKNSFSATYRGVLRDGSVVAVKSISKTSCKSDEGEFMKGLHMLTSLRSDNVVRLRGFCCSRGRGECFLIYDFVPNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISADKVLIDQRYNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRFSETSDVYAFGVMLFQILSGKHEITSSIRLAAESSKFQEFMDPNLHGRYFEYEAAKLAKIALLCSHESPFERPSMEGIVQELGNCSSCF 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01728 677 SUPERFAMILY L domain-like 23 233 - -
Gma10g01728 677 Gene3D Phosphorylase Kinase; domain 1 374 483 - -
Gma10g01728 677 Gene3D Ribonuclease Inhibitor 21 273 IPR032675 -
Gma10g01728 677 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 675 - -
Gma10g01728 677 ProSiteProfiles Protein kinase domain profile. 405 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01728 677 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Gma10g01728 677 Pfam Protein tyrosine and serine/threonine kinase 409 670 IPR001245 GO:0004672|GO:0006468
Gma10g01728 677 Gene3D Transferase(Phosphotransferase) domain 1 484 676 - -
Gma10g01728 677 SUPERFAMILY Protein kinase-like (PK-like) 379 670 IPR011009 -
Gma10g01728 677 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01728 Gma-Chr10 44448959 44451696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01728 8 518 Miscellaneous Gene Families AT4G22730 56.190 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gma10g01728 PK_Tyr_Ser-Thr 2.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01728 - - gmx:100775422 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01674 16 37771375 37774952 Gma10g01728 10 44448959 44451696 PCT
Gma09g01478 09 39497316 39500795 Gma10g01728 10 44448959 44451696 PCT
Gma10g01728 10 44448959 44451696 Gma16g01674 16 37771375 37774952 PCT
Gma10g01728 10 44448959 44451696 Gma09g01478 09 39497316 39500795 PCT