Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01727 ATGGCTTCCCTGGCGGCTTCCACCGCGGCTATGTCAGAAATCCTTGGAAACCCCGTTAACCTCAGATGCGCAACCAGGTCTGCTCCATCACCAACTACACCTGCCACCTTCAAGACCGTCGCACTTTTCTCCAAGAAGAAGCCAGCTCCACCTCCAAAGAAAAAGCCTGCCGCTGTATCCCCCGCCAATGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCTGAGATCCCCGAGTACTTGACCGGAGAAGTGCCTGGAGATTATGGTTATGATCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTCGCCAAGTACCAGGCGTTTGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTTTGCTTCTTGATGGGGGTACATTGAACTACTTCGGGAAACCTATCCCCATCAATCTTATTCTTGCTGTTGTTGCTGAGATAGTTCTTGTGGGTGGTGCTGAGTACTACAGAATTATTAATGGCCTGGACTTGGAAGACAAGCTTCATCCGGGTGGTCCATTCGACCCATTGGGACTAGCAAAGGATCCAGACCAAGCTGCACTTCTAAAGGTGAAGGAAATTAAGAATGGTAGACTAGCTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCATATGTCACTGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTGATTGCTGGCTCCGCTGAGAGGGCTCCAACTCTGTAA 864 0.4931 MASLAASTAAMSEILGNPVNLRCATRSAPSPTTPATFKTVALFSKKKPAPPPKKKPAAVSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLILAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01727 287 SUPERFAMILY Chlorophyll a-b binding protein 68 278 - -
Gma10g01727 287 Gene3D Chlorophyll a/b binding protein domain 76 287 - -
Gma10g01727 287 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 287 - -
Gma10g01727 287 Pfam Chlorophyll A-B binding protein 89 250 IPR022796 -
Gma10g01727 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 287 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01727 Gma-Chr10 44434830 44437659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01727 1 287 Chloroplast and Mitochondria Gene Families AT4G10340 81.944 1.62e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01727 K08916 - gmx:100820327 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01727 10 44434830 44437659 Gma10g01727 10 44434830 44437659 ECH
Gma16g01675 16 37785942 37789010 Gma10g01727 10 44434830 44437659 PCT
Gma09g01479 09 39516828 39519447 Gma10g01727 10 44434830 44437659 PCT
Gma10g01727 10 44434830 44437659 Gma16g01675 16 37785942 37789010 PCT
Gma10g01727 10 44434830 44437659 Gma09g01479 09 39516828 39519447 PCT