Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01720 ATGCCAAAGGAAGCTTGCCTCACCACCAAGACTAGTGGGGCACGTGAGATCATTGAAGAGGCTGGTTTGGATGGTCATTTGGGGTTAGCATTTGCCATCATGTATGAGAGAAGCTTGGGCGGGGACTCCCCTTTTGCTGGCTACCTTCAACTCTTGCCTTTCCAAGAGTGCGTGCCAATTGTTTGGACCCTCGATGAAGTAAACGAGCTTTTGTGTGGTACTGAGCTTCACCTGGTATACCTTTACTGGAAAGAGAATATTCTCCCCATATTGGATTTAGCACCTTTAAAACTAAATCCAAAGTTCTTTGGCATAGAACAATACTTTGCAGCAAAAAGTCTTATATCTTCACGGTCTTTTGAGATTGATAATTACCATGGTTTTGGCATGGTTCCCTTGGCAGATCTATTCAATCATAAAACAGGCGCTGAGGATGTGCATTTCACTGCCATGTCCTCTAATGATGAATCTGATACTGATGTTGATGGCTGTAACAATGATGAGGGCATTGTCGAGGAGGAAGCATTGGCTCAAAATTCCTCTATAGATATGACTGCGTTAAATAATGGGAACTGCAATGTCAGTGACTTGGATAGTTCTTCACTTAGTGAGAGTGATACTTCTATGCTGGAGATGATTATGACAAAAGATGTCAGCAGTGGAAGTGAGGTATTTAATACTTATGGGATACTGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAATTCCTATGATATTGTAAACATAGATATGGAACTGGTAATTCAATGGTGTTCTTCCGTGTTTTCGGACCGCCACAGTAGAGCAAGAGTTTCCCTTTGGAGAAGGTTAGGCTATTCTGTATGTGGCAGCCAAGACTCTGACTATTTTGAGATCTCATTTGATGGAGAACCACAGATTGAACTCCTCAGTTTGTTACACATCATGTTATTACCAGATAATGCCTACCATAAGTTAGACCTATCAGTATCGGTTGCCGGAAATTATGATGAATCAAATGGAACCACCCTTCTGAATGGTGATATCTTTCCTAGTAAAGCATTTAATATGAACAATAAATCCTTGCTGCCCAAAAAAGTTTGTGATGCCCTGTTGTCGCTTTCTGATATGAGGGAGAGTCTCTATGGTTTGAAATCAATTGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTTAATTAGAGAGAGAAAACTGTATCATTCTTTGATGCTGCGCATCAATGAAAGGAAGATCCTTCAGAGGCTCAGAAATTATGCTTCACAGCCATTTAAAAATAAAATCACGAACCATGGTTCTCCGAGGAAGAAGTTGAAAAGAACAACAAAGAAAACAAGTTGA 1353 0.4035 MPKEACLTTKTSGAREIIEEAGLDGHLGLAFAIMYERSLGGDSPFAGYLQLLPFQECVPIVWTLDEVNELLCGTELHLVYLYWKENILPILDLAPLKLNPKFFGIEQYFAAKSLISSRSFEIDNYHGFGMVPLADLFNHKTGAEDVHFTAMSSNDESDTDVDGCNNDEGIVEEEALAQNSSIDMTALNNGNCNVSDLDSSSLSESDTSMLEMIMTKDVSSGSEVFNTYGILGNAALLHRYGFTEQDNSYDIVNIDMELVIQWCSSVFSDRHSRARVSLWRRLGYSVCGSQDSDYFEISFDGEPQIELLSLLHIMLLPDNAYHKLDLSVSVAGNYDESNGTTLLNGDIFPSKAFNMNNKSLLPKKVCDALLSLSDMRESLYGLKSIEDDIEALGRCSLIRERKLYHSLMLRINERKILQRLRNYASQPFKNKITNHGSPRKKLKRTTKKTS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01720 450 MobiDBLite consensus disorder prediction 434 450 - -
Gma10g01720 450 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 2 430 - -
Gma10g01720 450 MobiDBLite consensus disorder prediction 427 450 - -
Gma10g01720 450 CDD SET_LSMT 2 243 - -
Gma10g01720 450 SUPERFAMILY SET domain 197 248 IPR046341 -
Gma10g01720 450 Gene3D set domain protein methyltransferase, domain 1 1 242 - -
Gma10g01720 450 ProSiteProfiles SET domain profile. 112 229 IPR001214 GO:0005515
Gma10g01720 450 PIRSF RMS1_SET 1 427 IPR011383 GO:0016279|GO:0018026
Gma10g01720 450 SUPERFAMILY SET domain 2 149 IPR046341 -
Gma10g01720 450 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 2 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01720 Gma-Chr10 44363663 44366326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01720 1 449 NAC Transcription Factor Family AT3G56570 50.823 4.24e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01720 K05302 - gmx:100794971 781.556