Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01706 ATGGCAACTCGAAGATATGAGTTTGGAAGGATGAATGAGGCTAGCCACCCAGACTCCATCAGAGCTGCCTTGGCTGAATTCCTCTCCACTTGCATCTTTGTCTTTGCTGGAGAAGGCTCTGCCCTTGCTTTGCGACAAATTTACAAGGAACCAGGGTCATCAGCGGGTGAGCTAGTGGTAATTGCACTAGCTCATGCATTTGCTCTATTTGCTGCTATTTCTGCTAGCATGCATGTGTCTGGTGGACACGTCAACCCTGCCGTCACTTTTGGCGCTCTTCTTGGTGGAAGGATCTCCGTCCTTAGAGCAGTTTACTATTGGGTTGCTCAACTTCTAGGTTCTATAGTGGCTGCTCTCTTGTTGAGGCTTGTCACTAACAACATGAGACCACAGGGGTTCAGTGTGTCAATCGGGCTTGGAGCGTTCCACGGTCTTGTACTTGAGATTGCTCTCACATTTGGTCTGATGTACACAGTCTATGCAACTGCTATTGATCCTAAAAGGGGTAGCATTGGCTCAATTGCACCCTTAGCCATTGGATTCGTTGTTGGGGCAAACATCCTTGCTGGTGGGCCGTTTGATGGAGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCCATGGTGGGCTGGAGATGGCACTACCACTGGATCTTCTGGGTGGGCCCATTCATTGGAGCTGCCCTTGCAGCACTCCTGTATGAATACGTTATGGTCCCAAATGAGCCTCCTCATCACCAACCTTTGGCTGCTGAAGATTACTAG 765 0.5007 MATRRYEFGRMNEASHPDSIRAALAEFLSTCIFVFAGEGSALALRQIYKEPGSSAGELVVIALAHAFALFAAISASMHVSGGHVNPAVTFGALLGGRISVLRAVYYWVAQLLGSIVAALLLRLVTNNMRPQGFSVSIGLGAFHGLVLEIALTFGLMYTVYATAIDPKRGSIGSIAPLAIGFVVGANILAGGPFDGACMNPARAFGPAMVGWRWHYHWIFWVGPFIGAALAALLYEYVMVPNEPPHHQPLAAEDY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01706 254 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Gma10g01706 254 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 Gene3D Glycerol uptake facilitator protein. 5 247 IPR023271 -
Gma10g01706 254 PANTHER AQUAPORIN-8 1 254 IPR034294 -
Gma10g01706 254 SUPERFAMILY Aquaporin-like 12 246 IPR023271 -
Gma10g01706 254 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma10g01706 254 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 254 - -
Gma10g01706 254 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01706 Gma-Chr10 44182973 44184590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01706 2 254 Major Intrinsic Protein MIP AT1G73190 68.939 2.81e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01706 K09873 - gmx:100814469 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01706 10 44182973 44184590 Gma10g01706 10 44182973 44184590 ECH