Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01641 ATGGCCAACCGGTGGTGGACCGGGTCGGTGGGTCTAGAGAACTCTGGCCACTCGATGAAAAAACCGGATCTGGGGTTTTCCATGAACGAGAGTACGGTGACGGGGAACCATATAGGAGAAGAAGATGAGGACAGAGAAAACAGCGACGAGCCAAGAGAGGGAGCTATTGACGTCGCCACCACGCGCCGCCCTAGGGGACGTCCACCGGGCTCCAGAAACAAGCCGAAACCGCCGATATTCGTCACCCGAGACAGCCCTAACGCGCTGCGGAGCCACGTCATGGAGATTGCCGTCGGAGCCGACATCGCCGACTGCGTGGCGCAGTTCGCTCGGAGGCGCCAGCGCGGGGTTTCCATTCTCAGCGGCAGCGGGACCGTCGTCAACGTCAATCTCCGGCAACCCACGGCACCCGGCGCCGTCATGGCGCTCCACGGCCGCTTCGACATCCTCTCCCTCACCGGCTCCTTTCTCCCTGGGCCGTCCCCTCCCGGCGCCACCGGGCTCACAATCTACCTCGCCGGAGGCCAGGGGCAGATCGTCGGCGGCGGAGTGGTGGGCCCGCTCGTGGCGGCGGGCCCCGTATTGGTAATGGCGGCTACTTTTTCCAATGCTACGTATGAAAGATTGCCTTTAGAGGATGATGATCAGGAACAACACGGCGGCGGAGGCGGAGGAGGTTCGCCGCAGGAAAAAACCGGGGGTCCCGGCGAGGCGTCGTCGTCGATTTCGGTTTATAACAATAATGTTCCTCCGAGTTTAGGTCTTCCGAATGGGCAACATCTGAACCATGAAGCTTATTCTTCTCCTTGGGGTCATTCTCCTCATGCCAGACCTCCTTTCTAA 843 0.6074 MANRWWTGSVGLENSGHSMKKPDLGFSMNESTVTGNHIGEEDEDRENSDEPREGAIDVATTRRPRGRPPGSRNKPKPPIFVTRDSPNALRSHVMEIAVGADIADCVAQFARRRQRGVSILSGSGTVVNVNLRQPTAPGAVMALHGRFDILSLTGSFLPGPSPPGATGLTIYLAGGQGQIVGGGVVGPLVAAGPVLVMAATFSNATYERLPLEDDDQEQHGGGGGGGSPQEKTGGPGEASSSISVYNNNVPPSLGLPNGQHLNHEAYSSPWGHSPHARPPF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01641 280 PIRSF ESCAROLA 9 280 IPR014476 GO:0003680
Gma10g01641 280 Gene3D - 89 218 - -
Gma10g01641 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 279 IPR014476 GO:0003680
Gma10g01641 280 MobiDBLite consensus disorder prediction 233 266 - -
Gma10g01641 280 MobiDBLite consensus disorder prediction 1 86 - -
Gma10g01641 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Gma10g01641 280 MobiDBLite consensus disorder prediction 213 280 - -
Gma10g01641 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 11 279 - -
Gma10g01641 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 215 - -
Gma10g01641 280 CDD DUF296 90 173 IPR005175 -
Gma10g01641 280 ProSiteProfiles PPC domain profile profile. 86 222 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01641 Gma-Chr10 43544943 43546356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01641 1 280 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.146 8.51e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01641 - - gmx:100795097 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01641 10 43544943 43546356 Gma20g02074 20 47981268 47982576 ECH
Gma10g01641 10 43544943 43546356 Gma10g01641 10 43544943 43546356 ECH