Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01632 ATGACGACACCACCGTCTTCCTCCTCAGCTTCGCAATCGCAGTTCGCCTATTCAAACCCCTCCTCCTCCTCCTCCTACTTCCCCGTTCCCTTTCACCTTCAGCAACCCGCAACCACTCACTACGCTGCGCCCTACGTCGCCGCCCCCTCCGTGCAAATCCCCGCTCCTCCAGTCGTCGGCCCCGTTGCGCCCGCCCCTGTACCCGGCGTATACTCCGCCGTGCCGCAATATCAGGCACAGCAGTTATTTGAGAGGGATGCGCAGATAATAACGCCGGAGGCTCTCGAGAATGTCAAGGCAGCGATTGCAAGCAGCGACGTGGAGCACAAAACCGATGCCAAAAAGAAAGCGGTTCCTCGCAAAGCTGCTGGCCACGCTTGGGAGGATCCTATCCTTGCAGAGTGGCCAGAAGATGATTATCGGCTCTTCTGTGGGGATCTTGGTAACGAGGTGAATGATGATGTTCTCTCAAAAGCATTTTCACGATTTCCTTCCTTTAACATGGCACGAGTTGTCAGAGACAAGCGGACTGGTAAAACAAAAGGTTATGGATTTGTGAGCTTTGCCAATCCTTCTGACCTTGCTGGTGCTCTTAAAGAAATGAATGGTAAGTATGTTGGAAACCGTCCTATAAAACTACGCAAGAGTAAGTGGAGGGAGAGGACAGATTATGAAGCACTGGAGAAACAGAAGAATCACATTCAAAAGAAACCGAAAATGGCAAGGAAAGGTGTGCTGCACAAGTGA 747 0.5167 MTTPPSSSSASQSQFAYSNPSSSSSYFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPVVGPVAPAPVPGVYSAVPQYQAQQLFERDAQIITPEALENVKAAIASSDVEHKTDAKKKAVPRKAAGHAWEDPILAEWPEDDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFANPSDLAGALKEMNGKYVGNRPIKLRKSKWRERTDYEALEKQKNHIQKKPKMARKGVLHK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01632 248 MobiDBLite consensus disorder prediction 1 24 - -
Gma10g01632 248 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 38 248 - -
Gma10g01632 248 Gene3D - 89 232 IPR012677 -
Gma10g01632 248 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 140 218 IPR000504 GO:0003723
Gma10g01632 248 SUPERFAMILY RNA-binding domain, RBD 123 220 IPR035979 GO:0003676
Gma10g01632 248 SMART rrm1_1 141 214 IPR000504 GO:0003723
Gma10g01632 248 PANTHER RNA-BINDING PROTEIN 42-LIKE 38 248 - -
Gma10g01632 248 CDD RRM_RBM42 134 216 IPR034215 -
Gma10g01632 248 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 142 212 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01632 Gma-Chr10 43456945 43460325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01632 142 228 Eukaryotic Initiation Factors Gene Family AT1G71770 30.693 8.67e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01632 K25079 - gmx:100791946 444.506