Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01629 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTAAAAGCAGCTGTTATGAAATATGGCAAGAACCAGTGGGCTCGAATCTCTTCTCTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTATGAGTGGCTCGATCCCTCCATAAAAAAGACTGAGTGGACGAGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACAATTGCTCCAATTGTTGGCCGTACCCCTTCCCAGTGTCTTGAGCGGTACGAGAAGCTCCTTGATGTAGCCTGTGTGAAGGATGAGAACTATGAGCCCGGTGATGATCCTCGGAAACTGCGTCCTGGGGAGATTGATCCAAACCCTGAGTCAAAACCTGCACGCCCCGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGGTTAGCCAACACAAAGGGCAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCTTTACAAAAGAAGAGAGAATTGAAGGCTGCTGGAATTGATATTAGGCAGCGGAAGAGAAAAAGGAAAGGAATAGATTACAATGCAGAAATTCCTTTTGAAAAAAGGCCCCCTCCAGGGTTTTTTGATGTTACAGATGAAGATAGACCAGTGGAACAGCCCCAGTTCCCTACTACAATTGAAGAACTTGAAGGGAAAAGGAGGGTTGATGTTGAGGCACAATTAAGAAAGCAGGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCTCCATCTGCCATATTGCATGCCAACAAGCTGAATGACCCAGAAACAGTAAGAAAGAGGTCAAAATTGATGCTTCCACCCCCGCAGATTTCAGATCAGGAATTGGATGATATTGCAAAGTTGGGTTATGCTAGTGACCTTGCAGGAAGTCAGGAACTTGCTGAAGGTAGTCGTGCAACACAGGCTCTTCTGACTAATTATGCACAGACACCTGGCCAAGGAATGACTCCTTTGCGAACCCCTCAGAGAACACCGGCTGGTAAAGGTGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGGCTGAGGGAGTCTCAAACACCATTGTTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCCGGTGTCACTCCTAAGAAAAAGGAGATTCAGACTCCAAACCCAATGCTGACTCCTTCTGCAACTCCTGGAGCTGCAGGTCTCACTCCTAGAATTGGCATGACACCAACAAGAGATGGTTTTTCTTTTAGCATGACACCAAAGGGAACTCCTCTTAGGGATGAGCTACATATTAATGAGGACATGAATATGCATGACAGCACTAAACTTGAGCTACAGAGACAGGCTGATATGAGAAGAAGTTTGCGTTCTGGTTTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGATAGTGATGCCACCTGTTCTAGAAGATGCCGAAGAGCCTGAGGAGAAAATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAAGCGGAAGAAGAGGCAAGGCAGCAGGCATTGCTTAGAAAGCGATCGAAAGTTCTTCAACGGGAACTTCCTAGGCCTCCTACAGCATCATTGGAGCTTATAAGAAATTCCTTGATGCGAACTGACGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGACGAGATGATTAGAAGGGAGCTTCTAACTTTGCTGGAGCATGACAATGGTAAGTATCCACTTGATGATAAAGTGATTAAGGAGAAAAAGAAAGGAGCCAAGCGTGCTGTAAATGGGTCTGCTGTCCCTGTGATAGAAGATTTTCAGGAAGATGAAATGAAAGAGGCTGATAAGTTGATAAAGGAAGAGGCCCTGTATCTTTGTGCAGCAATGGGTCATGAAGATGAACCCCTTGATGAATTTATTGAAGCACACAGAACCTGTCTCAATGATCTTATGTACTTTCCTACCCGTAATGCATATGGTCTCTCTAGTGTTGCTGGAAACATGGAAAAACTAGCAGCTTTGCAGAATGAGTTTGAGAATGTGAGAAACAAATTGGATGATGGTAAGGAGAAGATGGTACGGCTTGAGAAGAAGGTGATGGTTCTCACGCAAGGTTATGAGATGAGAGTAAAGAAAAGCCTGTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGATGTAGCTGCAACTGAGTTAGAATGCTTTAAAGCTTTGCAAAAGCAGGAACAATTGGCAGCATCACATAGGATAAACAATCTGTGGGGTGAAGTACAGAAGCAAAAAGAACTTGAGAAAACTTTGCAAAATAGGTATGGGAGTCTAATTGAAGAGCTGGAAAAGATGCAAAATGTCATGGACCAATGCAGATTACTAGCACAACAGCAAGAAGAAATTGAAGCAAACAACCATGCTCGTGAGTCAACTGAGATCATTGAGAGCAAGGCTGGTGAAACTGATGTACAGAGTACAGAAAATTGTGAAACTGTACCTGACTCAGTAGAGCATGGACATGCTCTAGCAGTTGAGTCATCTGATGATGGAACTGCTGACCAGCAAGTAGATATTGTGCATGACCAGGCTACTTCTAGCGTTAGCCATGACATGGATGTAGATTCTGATAAATTGGCTAATCCTACACCAGCTGCAGAGAATGTCGATGGAAAACTGGAAGTTACTGCTACTGCCAGCTATACTGATGATGGGAAGACCATGCTAGAAATGGGTGCTGCAGTGGAAGTAAGTAGCAGCCCCAATCATGATGTAGTTGCGGATGCTGTAAACTCACATGATAACAGCATGGAAGAAACCAATGCTGTTGGGGAGGAGACAAATTAG 2889 0.4438 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDVACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPQFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDDIAKLGYASDLAGSQELAEGSRATQALLTNYAQTPGQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGAAGLTPRIGMTPTRDGFSFSMTPKGTPLRDELHINEDMNMHDSTKLELQRQADMRRSLRSGLGSLPQPKNEYQIVMPPVLEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRTDGDKSSFVPPTSIEQADEMIRRELLTLLEHDNGKYPLDDKVIKEKKKGAKRAVNGSAVPVIEDFQEDEMKEADKLIKEEALYLCAAMGHEDEPLDEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRNKLDDGKEKMVRLEKKVMVLTQGYEMRVKKSLWPQIEATFKQMDVAATELECFKALQKQEQLAASHRINNLWGEVQKQKELEKTLQNRYGSLIEELEKMQNVMDQCRLLAQQQEEIEANNHARESTEIIESKAGETDVQSTENCETVPDSVEHGHALAVESSDDGTADQQVDIVHDQATSSVSHDMDVDSDKLANPTPAAENVDGKLEVTATASYTDDGKTMLEMGAAVEVSSSPNHDVVADAVNSHDNSMEETNAVGEETN 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01629 962 CDD SANT_CDC5_II 55 106 - -
Gma10g01629 962 Gene3D - 5 59 - -
Gma10g01629 962 MobiDBLite consensus disorder prediction 113 149 - -
Gma10g01629 962 MobiDBLite consensus disorder prediction 399 413 - -
Gma10g01629 962 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 798 - -
Gma10g01629 962 MobiDBLite consensus disorder prediction 266 285 - -
Gma10g01629 962 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Gma10g01629 962 Pfam Myb-like DNA-binding domain 10 70 - -
Gma10g01629 962 Gene3D - 60 114 - -
Gma10g01629 962 Coils Coil 682 716 - -
Gma10g01629 962 SUPERFAMILY Homeodomain-like 33 107 IPR009057 -
Gma10g01629 962 SMART sant 58 105 IPR001005 -
Gma10g01629 962 SMART sant 6 55 IPR001005 -
Gma10g01629 962 Coils Coil 167 187 - -
Gma10g01629 962 Coils Coil 782 819 - -
Gma10g01629 962 MobiDBLite consensus disorder prediction 381 422 - -
Gma10g01629 962 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Gma10g01629 962 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Gma10g01629 962 MobiDBLite consensus disorder prediction 879 901 - -
Gma10g01629 962 CDD SANT 10 53 IPR001005 -
Gma10g01629 962 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Gma10g01629 962 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01629 Gma-Chr10 43412561 43419315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01629 1 825 MYB-Related Transcription Factor Family AT1G09770 76.598 0.0 1242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma10g01629 Myb_Cef 2.4e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01629 K12860 - gmx:100790369 1859.73