Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01625 ATGGCTCCTCATCCAAGAGTCATTAAGGCTTATAATGCTATGAGGTCCTTGGGAATTTCTGATGAAGAGGTGAAACCGGTGTTGAAAAATTTGTTACAATTGTATGATAGAAACTGGGAACTTATTGAAGAAGACAACTATCGTACTCTTATAGATGCATACTTTGAGTTAAAGGAAGATAAGCAAACAGAAGGTAAGAGAAAGGCTCCAATCAGTTATCTTGATGGGAGAAAGCCAAAACATAAACTGCACTTGGTAGATGGAGATATCCAAGCTTCAGCAACTGACAACTCAAGTGAAGGGTTGTCTATAGAAGACACGGAAATACCTCCCAACGTTTTTAAACAGAAAATCATTAAACCTTCTCAAACCTCCATTGGACATATGGAGCCCACAACCAGTTCACAGGCATTGCAAACAGTGTCGAGTAAGGTAGACGGGATCTCAACTTTACCTTGCATGGCTGCTAGAGATAGAAAATTGCATCGTGGGAAGGCATCAGCTGCAGGGCATTGTGAAGATCCAATTGTTGAAACAAGCAATCCTCGTATCCAGAGGGAAAATATATCAAGTGATCATCATCAGAAGGAGCTGATGACACCAAGAACTGAGAAACTTAAGTTGCATCTTGGACCTGTTTCAACGAGTTACAATGTCTCATCTAATGCTTCAAATGGAAATTGTCGTGCCAAATCTCTATCAGCTCTGTATCAGAATGTGCACAAGGAAGATGCTACCTCAGCATGCAATAATAGCAAAAGAACTCAGAAGGGTAATATTGACATTGCCTCTTCACCTTTGGGAGAAATTAAAATTTCTTTAAACTATGATTTATGTGGAAGTTACTTGAAGCTGGGCTTGAGTTTAAGTCCAAACGGGTCAACTTCCAAGTTTGCTAATTCACGCAATGTGACATGTCTGCCACTGCAAACTGTTACTGAAGATGACAAGAATTCCTTTCACTTTCTTGATGACATAACAAAAGGTTCAGAGAATGTTAAAATATCATTGTTAGATGAAACTGGAAGTGAGGACGTGCCACAGTTTAATTACATACCCTATAATGTAATATATCAAGATGCTAACGTAAATATTTCACTTGCTCGTATTGCGGATGAGGGTTGCTGTGCTGATTGTGCTGGCGACTGTCTTTCCTTATCACTTCCTTGTGCATGTTCTCAAGAAACAGGTGGAGAGTTTGCTTACACTCCACGAGGCTTGTTGAAAGATGATTTTTTAAAAGCTTGCATGTCTATGAAATTGGAACCTCTAGATCATCATTTTGTGTATTGCCAAGAATGTCCATTGGAGAGGTCTAGGAATGACATCGTTCCCGAACCATGCAAGGGACATCTGGTTAGGAAGTTTATCAAGGAATGCTGGAGGAAATGTGGTTGTGACATGCAGTGTGGAAATCGGGTAGTGCAACGGGGTTTAAGATGTAAATTGCAGGTGTTTTTGACTCAAGAAGGAAAGGGATGGGGCGTCAGAACACTAGAAGATTTGCCTAAGGGATGTTTTGTATGTGAATATGCAGGGGAAATATTAACCAATACAGAATTATATGAAAGGATTATGCAGAAAAGCGGCAATGACAGACATACATATCCTGTAACCCTTGATGCAGATTGGGGCTCGGAAGGGGTGTTAAAGGATGAGGAGGCACTATGCTTAGATGCAACGTATAATGGAAATGTTGCAAGGTTTATCAATCATAGATGCTCGGACGCAAATCTGATAGACATTCCAGTTGAAGTAGAGACGCCTGATCGTCACTATTATCATCTTGCTCTATTCACAAACAGAAACGTGAATGCATACGAGGAATTTACATGGGACTATGGTATTGACTTCGATGATCATGAGCACCCCATTAAAGCATTTAATTGTTGTTGTGGAAGTCCCTTCTGCCGTGATAAGAAACAAAAAGTAAAAGCATTACATGGAAAGTTTCTCTTTCTCGTGGCGTGTTCTTTTCACCTCCATGACCACATTTCACAAGTCATGACAAGTGCACTGATTCCTTTCTTTTCGTTTTCCAAATTTACATTTTTGTCATTAGCTTCTAATAATTCGGTTGGGTTAGTTGCAAGGGATGACAAGGGTGGTCCCACAAAGGTGTTTAAGGAGACAGGTGCAAATAATTGTGTGATTTTCTGA 2160 0.4005 MAPHPRVIKAYNAMRSLGISDEEVKPVLKNLLQLYDRNWELIEEDNYRTLIDAYFELKEDKQTEGKRKAPISYLDGRKPKHKLHLVDGDIQASATDNSSEGLSIEDTEIPPNVFKQKIIKPSQTSIGHMEPTTSSQALQTVSSKVDGISTLPCMAARDRKLHRGKASAAGHCEDPIVETSNPRIQRENISSDHHQKELMTPRTEKLKLHLGPVSTSYNVSSNASNGNCRAKSLSALYQNVHKEDATSACNNSKRTQKGNIDIASSPLGEIKISLNYDLCGSYLKLGLSLSPNGSTSKFANSRNVTCLPLQTVTEDDKNSFHFLDDITKGSENVKISLLDETGSEDVPQFNYIPYNVIYQDANVNISLARIADEGCCADCAGDCLSLSLPCACSQETGGEFAYTPRGLLKDDFLKACMSMKLEPLDHHFVYCQECPLERSRNDIVPEPCKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFLTQEGKGWGVRTLEDLPKGCFVCEYAGEILTNTELYERIMQKSGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHLALFTNRNVNAYEEFTWDYGIDFDDHEHPIKAFNCCCGSPFCRDKKQKVKALHGKFLFLVACSFHLHDHISQVMTSALIPFFSFSKFTFLSLASNNSVGLVARDDKGGPTKVFKETGANNCVIF 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01625 719 CDD SET_SETDB-like 347 615 - -
Gma10g01625 719 SUPERFAMILY SET domain 333 638 IPR046341 -
Gma10g01625 719 SMART set_7 481 621 IPR001214 GO:0005515
Gma10g01625 719 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 646 - -
Gma10g01625 719 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 712 IPR025776 -
Gma10g01625 719 Gene3D SET domain 303 625 IPR046341 -
Gma10g01625 719 ProSiteProfiles SET domain profile. 481 615 IPR001214 GO:0005515
Gma10g01625 719 Pfam SET domain 493 615 IPR001214 GO:0005515
Gma10g01625 719 Gene3D - 1 60 IPR043017 -
Gma10g01625 719 SMART preset_2 323 465 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma10g01625 719 Pfam Pre-SET motif 326 473 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma10g01625 719 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Gma10g01625 719 ProSiteProfiles Pre-SET domain profile. 375 478 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma10g01625 719 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01625 Gma-Chr10 43367966 43380359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01625 457 630 C2H2 Transcription Factor Family AT2G23740 43.094 3.90e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma10g01625 Pre-SET 1.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01625 - - gsj:114402909 1190.25