Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01596 ATGGATAGGGTATTCTCAGTGGACGATATCTCCGATCATTTCTGGCCGCCGCCTCCGATCCCCGTCTCCGGCGCCAACACCTCCTCTCAGATGAGCCGCAGCGCCTCCGAGTGGGCCTTTCAGCGCTTCATCCAGGAAGCTTCCGCCTCCGCACCCTCTCCTCCGTCTTCTTCCTCCCCCGCCGACGTCGTATTCGTGGAGATCGATGATCAGCCCAAACCCACCCCTCCGCCTCCGTCACACGGCGGCGTTCTGCCCAGTGACCCTGGTCCCGTGGCCCTTGACTCCGAGGAATACCAGGCCTTTCTCAAGAGCAAGCTCAACCTCGCATGCGCCGCCGTCGCCATGACTAGGGGATCTTTGGCTAAATCTCAAGACCCGTCCCCTTTTTCTGATGGTGGATCACAGCCGACTAATCCTTCTCTAGTTGGATCTCAGACTACTTCTAAAGGATCTATTCCTTCTGGAAATGATCAATCTAAGTTACAAGATAAAGATATCAATGCACCAGTTGGGATTCCTTCCATACCTGCCATACAAAAGAAACCTGCTGTTGCAATTAGGCCATCTACAAGTGGATCATCAAGAGAACAGTCAGATGATGAGGACATTGAGGGAGAGACATCTATGAATGACAACACAGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTATCCAATAGGGAGTCAGCCCGTCGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAAGCGCCTTACTGATGTTAGTCAGAAATACAGCGACTCTGCTGTTGACAACAGAGTTTTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACTGGGTTGAACCCAATGCCTCATGCCATGTCTGATATATCATCATTGGGCCTGCCATCATTTGATGGAAGAAGCCCTTCAGACACTTCAGCTGATGCATCTGTTCCTGTGCAAGATGATCCACATCATCACTTCTATCAACCCACATTGAATAATCCTATTCCCAGTCATGATCCGATAGTCAACAATGGTTTGGGGGGCATTTCTTCAATTGAAAATGTGCAGCAGCAGAACGCTGCAGCAGTGGTAGGTGGGAACAAGATAGGTCAAACAGCATCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGACCTCCATCTGAGCAGTAA 1254 0.4928 MDRVFSVDDISDHFWPPPPIPVSGANTSSQMSRSASEWAFQRFIQEASASAPSPPSSSSPADVVFVEIDDQPKPTPPPPSHGGVLPSDPGPVALDSEEYQAFLKSKLNLACAAVAMTRGSLAKSQDPSPFSDGGSQPTNPSLVGSQTTSKGSIPSGNDQSKLQDKDINAPVGIPSIPAIQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMPHAMSDISSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQPTLNNPIPSHDPIVNNGLGGISSIENVQQQNAAAVVGGNKIGQTASLQRVASLEHLQKRIRGGPPSEQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01596 417 Coils Coil 278 298 - -
Gma10g01596 417 PANTHER BASIC LEUCINE ZIPPER 63 1 405 - -
Gma10g01596 417 SUPERFAMILY Leucine zipper domain 220 270 IPR046347 GO:0003700|GO:0006355
Gma10g01596 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Gma10g01596 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 270 IPR004827 GO:0003700|GO:0006355
Gma10g01596 417 CDD bZIP_plant_GBF1 221 272 IPR045314 GO:0003700|GO:0006355
Gma10g01596 417 Gene3D - 219 274 - -
Gma10g01596 417 MobiDBLite consensus disorder prediction 24 60 - -
Gma10g01596 417 MobiDBLite consensus disorder prediction 71 85 - -
Gma10g01596 417 Pfam bZIP transcription factor 219 271 IPR004827 GO:0003700|GO:0006355
Gma10g01596 417 Pfam Basic leucine-zipper C terminal 287 414 IPR020983 -
Gma10g01596 417 MobiDBLite consensus disorder prediction 214 229 - -
Gma10g01596 417 MobiDBLite consensus disorder prediction 121 164 - -
Gma10g01596 417 SMART brlzneu 216 280 IPR004827 GO:0003700|GO:0006355
Gma10g01596 417 Coils Coil 236 263 - -
Gma10g01596 417 PANTHER BZIP TRANSCRIPTION FACTOR 1 405 - -
Gma10g01596 417 MobiDBLite consensus disorder prediction 119 247 - -
Gma10g01596 417 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01596 Gma-Chr10 43055342 43058496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01596 1 308 bZIP Transcription Factor Family AT4G02640 42.073 7.26e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma10g01596 bZIP_C 2.9e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01596 K25784 - gmx:100170702 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01596 10 43055342 43058496 Gma10g01596 10 43055342 43058496 ECH
Gma19g02308 19 51771421 51776754 Gma10g01596 10 43055342 43058496 PCT
Gma03g02271 03 47982915 47988055 Gma10g01596 10 43055342 43058496 PCT
Gma10g01596 10 43055342 43058496 Gma19g02308 19 51771421 51776754 PCT
Gma10g01596 10 43055342 43058496 Gma03g02271 03 47982915 47988055 PCT