Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01587 ATGGCGGATTCTTCAAGCAACTCAAAGGATCACCACAACACGCGCGTCTACCACCCTTACCAGGACCTCAACGTCCCCATCCAGAAGCTCTACAACCTCCCCACCGCGCCGGAGCACCTCTTCCCGGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAATACTACACTGGCTCCGGCTACCTCGCCGGTGCCTTGATCGGAGCCGCCAGGGGCACCGTCCAGGGCCTCCGTGAGGCTGAGTCCGGCGACTCCCTCAAAATCCGACTCAACCGAGTCCTCAACTCGGGGGGCCACGCGGGTCGCAGACTCGGGAACTCGCTCGGCGTGGTGGGCCTCATCTTCGCGGGACTCGAGAGTGGGATGACCTACTTAAGGGGCACCGATGACCTCGTCAACAGCGCCGTCGCCGGACTCGGCACCGGAACGCTCTTTAGGGCCGCCGCCGGACCCCGATCCGCCGCTATTGCCGGCGCCATCGGCGGGATCGCCGCCGCCGCCGCGGTTTCCGGGAAGCAAGCTTTGAAAAGATACGTTCCGATCTAG 555 0.6486 MADSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGALIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLESGMTYLRGTDDLVNSAVAGLGTGTLFRAAAGPRSAAIAGAIGGIAAAAAVSGKQALKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01587 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Gma10g01587 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 184 - -
Gma10g01587 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01587 Gma-Chr10 42943378 42944296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01587 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 56.667 5.40e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01587 K17794 - gmx:100779163 328.946