Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01580 ATGAATGGGGTCACACACCTTGAACCAGATGAGTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTCGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGTTGTATGATTTCCTGCAAAGCCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGAAACATTATGAAGTTCTACACTTCTTGGGTCGATACTGCTAATAGGAACATCAACTTCGTGACTGAAATGTTCACATCCGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAGCGGACTTCTCTATCTTCATAGTCACGACCCACCGGTGATCCATAGAGATCTAAAATGTGATAATATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGGACGCCTGAGTTCATGGCCCCTGAAGTATATGAAGAGGCATACAACGAGTTAGTTGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTTACATTTGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTACAAAAAAGTTATTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCAGAAGTGCGGCAATTTGTTGAGAAATGCTTGGCCACAGTGTCTCTAAGGCTTTCTGCAAGGGAGCTTTTAGATGATCCATTTCTTCAAATTGACGATTATGAATATGATTTGAGAACTGTAGACAATGGGGAATTGGATGAATTTGGTCCTCTCATGAGACAGCCATTCTTTGATCTTCATCGAAGCTATAGTAACTTCAGTAATGAATACACGAATGGCTTTGGGTACGAAGGAGACTGGGGTCCTCATCCGGCTGAGATCGAACCTAGTGGAATTGAACTTTTTGAGTACCGTGATGATGATGAACCCTCTGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGTATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTGGACATGACTGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATTGATGAGACTCCCCGTTTTGCTAATCAAGGTTTATGTCACAATTGTGTGTCTAATCATACTTCTAGCGGTTCTTTTCTGGATTTTCTTTCAAACAATCCAGATAACAAGAACTTGCAACTTCTCGATTGTTGTAGGCATGGATGTGCTTCAATGCATGGACGGTTTGGGGAGATTACCTTCCAATCTGAAGAGTATGACAATCATGCTAGAGGGGATCTGAACATATCAAGCCAATTAGACAGCTTGCAGTATCAGGAGTTATGGAATCAGCATGAAAGTCGTGAATTGAGTCCGGTAGAGTCTGATCAAAGTCATTCTGATGAACAATATGAGCAATTAGATAAACCGATTCTTGCTAAAGACAAAGCACAGGATGTTTGGGAAGACAAGTTTTCCCCCAATGCAGCAAATTCTCTAAGAAATTTATCAGGAAGTCATGATTTCTCTACTATCCGATCGACCTATTGTGACCTTGAGGATGACTATGAGAAAGAGATCCAAAAGGAACTCAGATGGCTCAGAGCCAAGTACCAAATGGAGTTAAGGGATCACAAGGATCGACAGTTTGGGCAATGTTCGCATAGTTGTAACAGTGAGCACAGAACAGAAAATGGCTTTTTGTCACCTTCACTGACAGAAACATTAAAAGGAGGCAACAATGGGACTCAGTTGAAACCCATTACTACCAAGTGGAATTGTGATTCCAGTAGTCACCCTCATGTCCATGAAAGCAGCCCCAATTCGGACACCCAAAGGGCCCAAAATTGTGTGGCGATTAAATCCCCTGGAGAAGGTATGGTTACTGCAAAGAGTTTTTACACGGGCTCATTGCTTCCACACTCTTTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTGATATATAA 2217 0.4172 MNGVTHLEPDESEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLRTVDNGELDEFGPLMRQPFFDLHRSYSNFSNEYTNGFGYEGDWGPHPAEIEPSGIELFEYRDDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGLCHNCVSNHTSSGSFLDFLSNNPDNKNLQLLDCCRHGCASMHGRFGEITFQSEEYDNHARGDLNISSQLDSLQYQELWNQHESRELSPVESDQSHSDEQYEQLDKPILAKDKAQDVWEDKFSPNAANSLRNLSGSHDFSTIRSTYCDLEDDYEKEIQKELRWLRAKYQMELRDHKDRQFGQCSHSCNSEHRTENGFLSPSLTETLKGGNNGTQLKPITTKWNCDSSSHPHVHESSPNSDTQRAQNCVAIKSPGEGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01580 738 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01580 738 MobiDBLite consensus disorder prediction 675 695 - -
Gma10g01580 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 727 - -
Gma10g01580 738 CDD STKc_WNK 22 281 - -
Gma10g01580 738 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 375 428 IPR024678 GO:0004674|GO:0005524
Gma10g01580 738 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 727 - -
Gma10g01580 738 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01580 738 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01580 738 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Gma10g01580 738 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gma10g01580 738 Gene3D - 372 437 - -
Gma10g01580 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gma10g01580 738 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01580 Gma-Chr10 42872932 42876461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01580 127 632 MAP Kinase Kinase Kinase AT3G04910 60.367 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma10g01580 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01580 K08867 - gmx:100775959 1528.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01580 10 42872932 42876461 Gma10g01580 10 42872932 42876461 ECH
Gma10g01580 10 42872932 42876461 Gma20g02129 20 48556305 48559683 GST
Gma19g02289 19 51621223 51624484 Gma10g01580 10 42872932 42876461 PCT
Gma03g02254 03 47854166 47857218 Gma10g01580 10 42872932 42876461 PCT
Gma10g01580 10 42872932 42876461 Gma19g02289 19 51621223 51624484 PCT
Gma10g01580 10 42872932 42876461 Gma03g02254 03 47854166 47857218 PCT