Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01577 ATGTCAGTTTCTACATTTGTAGGCTTTGAATTCCCCAGTTTTGAAAGTGCTCATCCTGAAATGTTGGGTCGGTGGGGGAGGGTGGAAAGGTGGGATAGGGTGGTGGGTGATTGTGTTGTTGAAATTCGTGGGACCGAAGGAGGAGAAGCTGTGTACAAGGGAGTTGTGGAGGGAAGTGAAAATCATCAAATGCACAACTGCCATAAACGAACAAACGGCTACCTTGACACTCTAATATGCGAAAAAAGGAAATGTGATATCTCCTCAACAATGCTTTCCCGGTTGGTTTCTTGGATCTTGTCGCCCTCCTCTTCTGAAGAAGAAGAAGAAATCCTTGACATCATCAAAGATAATGACATTAACCATGAAAACGACCAAAAGTTCAACGTAGAAGATGACAAGAACGACCATTTTCTTAACTCATGCGATGTGGACGACACCATTCCCATTGCACTTGCCGTTCCCAATGCCTCCCCCGCCGTGACAGTGGCCTTCCCGGCCAATGACGAAAGAAACACCGTCCCAACCACCGCCACTGTGGCCACTATAGTAACACGCTCAAAAGGGCAGCGCAACGCCAAGTATTCCGGAATGGTGAGACAATACCAAAGGCTGTGGACGAAGGAGGATGAGATGGAACTGTTGAAGGGATACCTTGATTACGTCAAGCAGCATAGAAAGGAAACCACCACCCTTCAAAACGTCGTAGTTTCATTGTATGATCACGTAAGGCCCAAACTAAACATCGATTTCAACAGAAACCAGCTTGTTGAGAAACTGCGTAGGTTAAAGAGAAAACACAAGTTGGCTTTGGAAAAAGGCAAGGACAAGGAGGTTCCCTTTAGGAACCCCCAGGAGCAGGCCATTTTTGAAATTTCCCACAAGATTTGGGCCAATGACACAGATAATATAATAGTCCAAGATGCCTTGGATGGTGATGAATCAGGACACACTCCTGAAAGTCATGATCATGTTGGCAACGTCAAGGTGAAGATTGAACAAGTTGACAACAGTGATGAAATAGGCAATAGAGTGCCAAAGCGGTTGCGGCTAGATGATGCAGACGATATGAACAGAACAAATGACCAGAACAATGGTGATAGCATACAAGGCTTCATTGAGGACACCATGAGGTCCTGTTTCTCACCATTGCTGAAGGAAGTGTTGGATGAAGCACAGGAAGAGTCACTTCCTGAGTTGGAGGCAATCCCAATGCCGCTATGCTCCGGGGAAGTGGACCATGAACAATGGAGAAAACGGAGGATTTTGGAGTTGGAGGTGTATGTGAAGCGGTTGGAGTTGTTGCAGAATCAGATCAAGTCTAGATTGGAAGAGTTGCGATCTAGCTGA 1350 0.46 MSVSTFVGFEFPSFESAHPEMLGRWGRVERWDRVVGDCVVEIRGTEGGEAVYKGVVEGSENHQMHNCHKRTNGYLDTLICEKRKCDISSTMLSRLVSWILSPSSSEEEEEILDIIKDNDINHENDQKFNVEDDKNDHFLNSCDVDDTIPIALAVPNASPAVTVAFPANDERNTVPTTATVATIVTRSKGQRNAKYSGMVRQYQRLWTKEDEMELLKGYLDYVKQHRKETTTLQNVVVSLYDHVRPKLNIDFNRNQLVEKLRRLKRKHKLALEKGKDKEVPFRNPQEQAIFEISHKIWANDTDNIIVQDALDGDESGHTPESHDHVGNVKVKIEQVDNSDEIGNRVPKRLRLDDADDMNRTNDQNNGDSIQGFIEDTMRSCFSPLLKEVLDEAQEESLPELEAIPMPLCSGEVDHEQWRKRRILELEVYVKRLELLQNQIKSRLEELRSS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01577 449 Coils Coil 253 273 - -
Gma10g01577 449 Pfam Protein of unknown function, DUF573 203 297 IPR007592 GO:0006355
Gma10g01577 449 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 91 449 - -
Gma10g01577 449 Coils Coil 425 449 - -
Gma10g01577 449 PANTHER BNAANNG10740D PROTEIN-RELATED 91 449 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01577 Gma-Chr10 42856280 42858050 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01577 151 448 GeBP Transcription Factor Family AT5G28040 33.518 1.94e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma10g01577 DUF573 5.8e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01577 - - gmx:102662842 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01577 10 42856280 42858050 Gma20g02133 20 48574445 48575518 GST
Gma19g02286 19 51597137 51600875 Gma10g01577 10 42856280 42858050 PCT
Gma03g02251 03 47837212 47838971 Gma10g01577 10 42856280 42858050 PCT
Gma10g01577 10 42856280 42858050 Gma19g02286 19 51597137 51600875 PCT
Gma10g01577 10 42856280 42858050 Gma03g02251 03 47837212 47838971 PCT