Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01575 ATGGAATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTCGACGACGACGACGACGACGACGATGAAACTCCAGAGGACGAAGAGGACTACGACGACGAAACCGAACCCCCTCCCTTCGTCCTCGCCGTCGTAGCAGTCGCGCCGCCCGCTTCCACCGCCTCCGAAACACTCGACACCACGTTGATCCCGATCTCCGCCGTCGCCGATTCCTCACTGAAACCACTGCACCCGGAGCTAATCGAGGAGAAAAAAGCGCTGGACGATTCGCGGCGACTGTTCCAGCGTCTGTGGACGGACGAGGACGAGATCGGGCTCTTGCAGGGGTTTCTGGACTACACGGCGCAGCGAGGATCCTCTCACCACAGCGATACCGCCTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGGCTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCGTCACCAAAATCAGCTCCGGCAAGGATGTCTCCTTCAAGAGCCCTCACGACAAAGCCACCTTCGAAATCTCACGCAGGATATGGAGCAACACCGCTCCAATAAGCGGTCCCGTCGAAGACGACGACGAAATCAACCCTAACCCTAATTTCGGCAATTCCGCGAAGACACCTATCTCGCGGAAGCGGTCGCGGCCTCAGAAGCGCGAGTTGAACGACGGTTCAACATTGAATAGAGATAATAATTGTATTGgcaataataataataatagcaatagtaataataataataatgagaattgtaatGGTAGGCATAACTTACAGGGTTTGATTGAAGAGACGGTTAAGAGTTGCGTGTCGCCGGTGTTGAAGGAGTTGGTGTGTGGTACCGGTGGCATGGGATTGGGAAGAGAGTTTGGAGTTGGAGGAGGACTTGCATTGAATTCCTTGCAAACTCAAATGACAATGCCAATGACTTTATTGAATTTGAGGATTGGGGAAACAACGATGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGCTGGAAGTGTATTCCAAGCGTTTGGAATTGGTGCAGAATGAGATCAAGGTTGCTCTCGAGGAGTTGCGATCAGCTGGAGGAGTATAA 1107 0.5041 MESDLNDAVFPEEDLDDDDDDDDETPEDEEDYDDETEPPPFVLAVVAVAPPASTASETLDTTLIPISAVADSSLKPLHPELIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLDYTAQRGSSHHSDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVVTKISSGKDVSFKSPHDKATFEISRRIWSNTAPISGPVEDDDEINPNPNFGNSAKTPISRKRSRPQKRELNDGSTLNRDNNCIGNNNNNSNSNNNNNENCNGRHNLQGLIEETVKSCVSPVLKELVCGTGGMGLGREFGVGGGLALNSLQTQMTMPMTLLNLRIGETTMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSAGGV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01575 368 MobiDBLite consensus disorder prediction 235 256 - -
Gma10g01575 368 MobiDBLite consensus disorder prediction 1 40 - -
Gma10g01575 368 Coils Coil 334 361 - -
Gma10g01575 368 MobiDBLite consensus disorder prediction 194 256 - -
Gma10g01575 368 MobiDBLite consensus disorder prediction 1 37 - -
Gma10g01575 368 Coils Coil 143 163 - -
Gma10g01575 368 PANTHER BNAANNG10740D PROTEIN-RELATED 1 366 IPR007592 GO:0006355
Gma10g01575 368 PANTHER BNAANNG10740D PROTEIN 1 366 - -
Gma10g01575 368 Pfam Protein of unknown function, DUF573 95 189 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01575 Gma-Chr10 42845199 42847047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01575 31 364 GeBP Transcription Factor Family AT5G28040 45.989 1.75e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma10g01575 DUF573 4e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01575 - - gsj:114372132 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01575 10 42845199 42847047 Gma20g02134 20 48584150 48585740 GST