Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01568 ATGAGTGAGAGAGTGAAGAAAGAAAAGCAAACGGGGGAGAAAAGGGAGAGGATGAAGAACATCTTCAAGAAGCTGCACATAGGTAGCAGCCACGATCCTCATCGATCCAATGAGGCTTCACCGTCTGTGCCGTCGCCGTCGTGCGTTGCCGATCAGTCCCAGAGCTCCGCCGCCACTCCGGCGAGTCCTTCGTCGGCGTCGGCGTCGGCGTCCACGGTGGTGGTGACTCCCGGAGGAGGAGGCGGCGGCGCGAGTCCGGTGATGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTTCAGCTAGCCCTAGCTATCAGCGCTTCGAATTCGGAGTTCCGTGAGGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTTTTGAGCTTGGGAGGCCATCGAATCGATTCGGCGCGGAACAAGGATGATGTGGCGGAGGCGCTGTCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTGGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCAGTAATGCAAGGAAAGATGCCATCTCGAACAGATCTTGAAGCAAACCCTGGAGGTTCTGAGTTGGTCATTGTTAATCGAACAATTGATCCTTCTCTGGAGGAACTGATACAAATTGCACAATGCATTGCATTAGACTGCCCTGTCTCTAGTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAAGACATCTCTTCACACAATTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTCGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATCCCAGCTGATATTTTAAGCACCAAGGATAGTGCCTTTAAGCCTTACAATCCCAAGATTTGGCCAAGTTTACCCTCCACTAAGGATAATGAATTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTGGTAAAAGATTATTCACTGCCCTGGAATGGAAAACCATATTTTGAGAAGTCAGAGCCTTCAAACTTAGGTTTGAGTAGAGACAGTGGCGTTGGTCCTTCTAAAATTCCTAATAAAGGGACTCCTAACCAACTAGAAAATTTGCCAGCCTTGTCTGGTACTTCTCTGTACAAAGGGACTCTTGGAATGAATACAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATACTAATAACAGCCCCAATGACTCTCGGAACCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCCCTGTGCATAACAAACCTGTGGAAAATAAACCTCCTGAGCTTAAAAGTACTAAAAACAATGCTGTTTCTGGTCGACCCCCAGTGCCACTGATGTGGAAGAATCGTCATGCTTACAATGAAGACCCCAGGAAAACTAATCATAATCCTAATGAATACAACCCTCCCTTATTTGTTTCCAATGGTTCTTCTATGTCTGAAATTATTGACCTTAGTAGTTCCAAGCCGTTGTATAATTCAAATATAAATAATGATGTAAATGCTCAAACTTTGGCGCAAGTTACTGGTTCAGTTTCACCACCTAATCATGACCAGAGGAACTGTACATATGACAGATTCATGGGAAGCAATTTGAAATTAAAAGATCCAGAGAGTCCTAGCTCATCATCAATTGATTCCATCACAAACAGGGTTGATCAAATATTGGATGATGTAGATGTTGGTGAATGCGAGATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTATAGGTTCATATGGAGAGGTATACCATGCTGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCATTATCAGAATTCAAAAGAGAAGTGCGGATAATGCGTAGGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTGTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATTGATGAGAAACGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCATCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGGTTGTCACGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAATGCGATGTTTATAGTTTTGGAGTCATCTTATGGGAGCTTGCCACTCTAAGGTTGCCGTGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTTGGTTTCCAAAACCGTAGACTTGATATTCCTAAGGAAGTCGATCCTATAGTTGCAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCGCAACTCACAGTGGCTCTAAAGCCTCTACAGCGTCTGGTTATCCCATCTTATCAAGATCAGTTAGCTCCACCTATGCCGCAGGAGATTTCTGTAAATTCCACCCCCTGA 2796 0.4435 MSERVKKEKQTGEKRERMKNIFKKLHIGSSHDPHRSNEASPSVPSPSCVADQSQSSAATPASPSSASASASTVVVTPGGGGGGASPVMNRQDFFSSEEEFQVQLALAISASNSEFREDPEKDQIHAATLLSLGGHRIDSARNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPGGSELVIVNRTIDPSLEELIQIAQCIALDCPVSSLVQRLAELVTSHMGGPVKDASIMLARWTETRAELKTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSTKDSAFKPYNPKIWPSLPSTKDNEFSYSRPIQPSHGEGSSQNSVVKDYSLPWNGKPYFEKSEPSNLGLSRDSGVGPSKIPNKGTPNQLENLPALSGTSLYKGTLGMNTVGDGTRLNVNVVPYTNNSPNDSRNLFADLNPFQIKGMGKAPVHNKPVENKPPELKSTKNNAVSGRPPVPLMWKNRHAYNEDPRKTNHNPNEYNPPLFVSNGSSMSEIIDLSSSKPLYNSNINNDVNAQTLAQVTGSVSPPNHDQRNCTYDRFMGSNLKLKDPESPSSSSIDSITNRVDQILDDVDVGECEIPWEDLVLGERIGIGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPIVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSYQDQLAPPMPQEISVNSTP 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01568 931 SUPERFAMILY Protein kinase-like (PK-like) 640 924 IPR011009 -
Gma10g01568 931 PANTHER SERINE-THREONINE PROTEIN KINASE 588 923 - -
Gma10g01568 931 PANTHER SERINE-THREONINE PROTEIN KINASE 84 569 - -
Gma10g01568 931 ProSiteProfiles Protein kinase domain profile. 650 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01568 931 Pfam Ethylene-responsive protein kinase Le-CTR1 147 340 - -
Gma10g01568 931 Gene3D Transferase(Phosphotransferase) domain 1 729 911 - -
Gma10g01568 931 SMART serkin_6 650 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01568 931 CDD STKc_MAP3K-like 656 899 - -
Gma10g01568 931 ProSitePatterns Protein kinases ATP-binding region signature. 656 678 IPR017441 GO:0005524
Gma10g01568 931 MobiDBLite consensus disorder prediction 1 73 - -
Gma10g01568 931 Pfam Protein tyrosine and serine/threonine kinase 651 900 IPR001245 GO:0004672|GO:0006468
Gma10g01568 931 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 588 923 - -
Gma10g01568 931 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 84 569 - -
Gma10g01568 931 Gene3D Phosphorylase Kinase; domain 1 643 727 - -
Gma10g01568 931 PRINTS Tyrosine kinase catalytic domain signature 724 737 IPR001245 GO:0004672|GO:0006468
Gma10g01568 931 PRINTS Tyrosine kinase catalytic domain signature 763 781 IPR001245 GO:0004672|GO:0006468
Gma10g01568 931 PRINTS Tyrosine kinase catalytic domain signature 810 820 IPR001245 GO:0004672|GO:0006468
Gma10g01568 931 PRINTS Tyrosine kinase catalytic domain signature 829 851 IPR001245 GO:0004672|GO:0006468
Gma10g01568 931 PRINTS Tyrosine kinase catalytic domain signature 873 895 IPR001245 GO:0004672|GO:0006468
Gma10g01568 931 MobiDBLite consensus disorder prediction 1 33 - -
Gma10g01568 931 MobiDBLite consensus disorder prediction 407 432 - -
Gma10g01568 931 MobiDBLite consensus disorder prediction 34 73 - -
Gma10g01568 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01568 Gma-Chr10 42724511 42732508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01568 18 886 MAP Kinase Kinase Kinase AT1G08720 56.108 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma10g01568 PK_Tyr_Ser-Thr 2.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01568 - - gmx:100817822 1805.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01568 10 42724511 42732508 Gma10g01568 10 42724511 42732508 ECH
Gma10g01568 10 42724511 42732508 Gma13g01095 13 25105772 25108200 GST
Gma10g01568 10 42724511 42732508 Gma19g01617 19 45584040 45585744 PCT
Gma10g01568 10 42724511 42732508 Gma03g01563 03 41900014 41902335 PCT