Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01567 ATGCCTGTTCCTAATGGAGAAGAGCAGATTCTGTTACCTGAAACTGAAAATGCAAGTGAGGTTTCGAAATCACCCTCATTGGATTTGAACCCAGATTCAGTTGATGGGTCCCCACCTGTTTCCACCGTTTACACTGATGTGGGTGTCGTCCCAGAACACCAAAAGAACGAGCTTGAGCACTTGATATCCAATTTAGAAGGTGAAATTGAGGAGCTGAGGCTCAAGCAGAAGAAATTGGATAAAAAGCGGAGAGAAGAATTAAGCAAGATATTGGACATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCGAATCTGGTTACAGAGAAGAGAAAATTTTCTGAACCGGTATCGGCTGGACCAGAGAAAATTCGGGTTAAGTTCGGGGGGACGAGGAAAGATTTTGAGTTTGATAAGGTTTTTACCCAAGAAGCAAGCCAAGGCTATGTTTTTGTGGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGTGTTTTTGCCTATGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAACGAGGAGCCAGGAATTATTCCGCGTGCACTTGAAGAGCTCTTTCGTCAAGCCTCTTTGGATAATTCATCTTCTTTTACTTTTACAATGAGCATGTTGGAAGTTTATATGGGCAATCTCAGGGATTTGTTATCTCCAAGACAGTCTGGCAGACCACATGAACAATATATGACAAAGTGCAATCTCAATATTCAAACAGATCCAAAGGGATTGATTGAAATTGAGGGTCTCTCAGAAGTGCAAATTAGTGATTATGCTAAAGCCAAATGGTGGTACAACAAGGGCAAACGGTTCAGATCCACCTCTTGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATAAGCATATTTCGGCGTGGGGATGCATTGGAAGCCAAAAGTGAAGTAAGTAAATTGTGGATGATTGATCTTGGAGGCAGCGAAAGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTTGATGAGGGCAGAGCCATTAATCTTTCCCTTTCAGCTTTAGCTGATGTTGTTGCTGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGGAATAGCAAGCTGACTCAAATACTGAAAGATTCTCTTGGGTATGGCTCAAAGGTGTTGATGTTGGTGCATATAAGCCCTTCTGAAGAGGATGTTTGCGAAACAGTTTGTTCCTTAAATTTTGCAAAGAGAGCGAGAGCAATAGAGTCCAACAAAGAAGTGCCAGTGGAAGTGAAGAAGCAAAAAGAGAAGAAGATTATGGAGCTAGAGGAAGACATCAAGGAAGCCGAAAAACAGAGCCAGAATTTAAGGGAACAAATACAGCAGATTGAGTTGAAGTTAAATGAGAGTAAAAAGCTCTTATTTACCACATATAGTCTTGTGGAAAGTGATCACATTGCAACCTCAATTAGCCCCAAAGATGATGTCAAAGAGGTCATTGAAACCCCTAAAGCATCCAAGAAGTCCATTAAAAGAAATTTCACCAATTCAATGCCTCGATTCATGACTTCAACTGTTGCAAGTCGCCAAAGGCAAAGTGCTGCAGAACGAGACATTGGTACTGTGAGATTGAAAAGTTTTAGATCAATTGCCTCTAAAAGTTCCATCAATTTTTCATATTCCCAATCATTGAGTTATTCAGATATCCGCATCAAAGCAATACTGCGAAGTTCAAATGGAAAATCTCGGTACGCTGAAGCAGATAGTGTTCCAATTCCAAAGACTGTTCTCACAGAAAAGCCTAAATGCAACAATGATTTGGAACCAAAAGTCACAACTCCTCGAAGCAAGATGGTTACATCATCAGACCAAAACTTTAGAGTTTCATTGGGTCGTCACAGAAGAAGGATGTCTGATTTGATCTAA 1929 0.4137 MPVPNGEEQILLPETENASEVSKSPSLDLNPDSVDGSPPVSTVYTDVGVVPEHQKNELEHLISNLEGEIEELRLKQKKLDKKRREELSKILDIKGSIRVFCRIRPNLVTEKRKFSEPVSAGPEKIRVKFGGTRKDFEFDKVFTQEASQGYVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEEPGIIPRALEELFRQASLDNSSSFTFTMSMLEVYMGNLRDLLSPRQSGRPHEQYMTKCNLNIQTDPKGLIEIEGLSEVQISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHCLTRISIFRRGDALEAKSEVSKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKRKRCHVPYRNSKLTQILKDSLGYGSKVLMLVHISPSEEDVCETVCSLNFAKRARAIESNKEVPVEVKKQKEKKIMELEEDIKEAEKQSQNLREQIQQIELKLNESKKLLFTTYSLVESDHIATSISPKDDVKEVIETPKASKKSIKRNFTNSMPRFMTSTVASRQRQSAAERDIGTVRLKSFRSIASKSSINFSYSQSLSYSDIRIKAILRSSNGKSRYAEADSVPIPKTVLTEKPKCNNDLEPKVTTPRSKMVTSSDQNFRVSLGRHRRRMSDLI 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01567 642 MobiDBLite consensus disorder prediction 1 40 - -
Gma10g01567 642 Coils Coil 433 474 - -
Gma10g01567 642 Coils Coil 55 89 - -
Gma10g01567 642 MobiDBLite consensus disorder prediction 15 40 - -
Gma10g01567 642 MobiDBLite consensus disorder prediction 601 625 - -
Gma10g01567 642 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 3 637 - -
Gma10g01567 642 MobiDBLite consensus disorder prediction 610 625 - -
Gma10g01567 642 ProSiteProfiles Kinesin motor domain profile. 96 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01567 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 464 IPR027417 -
Gma10g01567 642 Gene3D Kinesin motor domain 91 468 IPR036961 -
Gma10g01567 642 SMART kinesin_4 94 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01567 642 PRINTS Kinesin heavy chain signature 165 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01567 642 PRINTS Kinesin heavy chain signature 372 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01567 642 PRINTS Kinesin heavy chain signature 291 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01567 642 PRINTS Kinesin heavy chain signature 323 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01567 642 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 637 - -
Gma10g01567 642 Pfam Kinesin motor domain 127 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01567 Gma-Chr10 42718231 42721671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01567 54 422 Calmodulin-binding Proteins AT5G65930 38.933 5.45e-70 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01567 - - gmx:100785581 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01567 10 42718231 42721671 Gma10g01567 10 42718231 42721671 ECH
Gma10g01567 10 42718231 42721671 Gma20g02145 20 48680290 48683736 GST