Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01557 ATGGAGTTCAACAAGGACGAGGCTGTGAGGGCTAGGCAAGTTGCAGAAGCTAGAATGCAAAGAGGTGAATTTGTGGAGGCACTCAAGTTTGCTACCAAGGCCAAAAAATTGTGTGCTGACGTTGTAAACATTACCCATGTTATTACAATTTGTGAGGTTCACAATGCTGCAAAGAAAAAACTCTCTGCCACTGATTTGGACTGGTATGCAATTCTTCAGATTGAAGGGTTGGCTGATGAAGCAGCCATAAAGAAACAGTACAGGAGGCTTGCATTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGGTTGGGCAAGCTAAAGGGGTCTTGAGTGACCAAGCAAAACGTTCTTTGTTTGACAAGAATTTTGGAGCCTCCGTGAGAGGTGCTGCAGTGAAATCCACTGGTTCCAAGAAGCAAGTTAGACAGAAGACATTCTGGACATGTTGCCAACATTGTAATGCTAAGTACCAGTACTCCATACCATTTTTAAATGCAACTTTACGCTGTCAACAGTGTTTGAAGACCTTTAAAGCTGGTGCTATTCCTTTTGTTGTCCAGAAAGAATCTCCAGTGCATGGTCCTCCAAAACCAGCCTCAGAAAATACTGGTGGAAATCCCCTTGGTAGAGACCATGCTGGTACGTTTGGGCGGTCAAATCCTGTGCCTATGAAAAAATGTGCTGCTGGAGTTGGTGTTCATTGTGAAGGTGAAAAGAGTAAAGATGGCCACGTTCCTGCATCCAGAGGCATGGACCCCCAAACCTCTAAAAATGTTGGAAGTAAAAGAGTATGGCAGTCAGCACCAGATTCAGGAGAAAGTTTCAAGGCTGGTAATGGTGATGAGATGAAAGATGCTTATGTTCAAGAAAATGCTGTTGATCCTTCGAGACTTAATGCAGGGAGATCTTCCAGGAAAAAGCAGCATTTTTAA 957 0.4357 MEFNKDEAVRARQVAEARMQRGEFVEALKFATKAKKLCADVVNITHVITICEVHNAAKKKLSATDLDWYAILQIEGLADEAAIKKQYRRLALLLHPDKNKFAGAEAAFKLVGQAKGVLSDQAKRSLFDKNFGASVRGAAVKSTGSKKQVRQKTFWTCCQHCNAKYQYSIPFLNATLRCQQCLKTFKAGAIPFVVQKESPVHGPPKPASENTGGNPLGRDHAGTFGRSNPVPMKKCAAGVGVHCEGEKSKDGHVPASRGMDPQTSKNVGSKRVWQSAPDSGESFKAGNGDEMKDAYVQENAVDPSRLNAGRSSRKKQHF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01557 318 MobiDBLite consensus disorder prediction 246 318 - -
Gma10g01557 318 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gma10g01557 318 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gma10g01557 318 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gma10g01557 318 PRINTS DnaJ domain signature 123 142 IPR001623 -
Gma10g01557 318 MobiDBLite consensus disorder prediction 259 276 - -
Gma10g01557 318 Pfam DnaJ domain 67 128 IPR001623 -
Gma10g01557 318 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 317 - -
Gma10g01557 318 SMART dnaj_3 66 123 IPR001623 -
Gma10g01557 318 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Gma10g01557 318 CDD DnaJ 67 120 IPR001623 -
Gma10g01557 318 PANTHER - 1 317 - -
Gma10g01557 318 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gma10g01557 318 Gene3D DnaJ domain 52 153 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01557 Gma-Chr10 42625000 42625956 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01557 4 191 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.518 2.41e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01557 - - gsj:114370736 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01557 10 42625000 42625956 Gma10g01557 10 42625000 42625956 ECH
Gma10g01557 10 42625000 42625956 Gma20g02154 20 48753507 48755636 GST