Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma10g01534 | ATGGATCATCAAGGGCATGGGCATGGGCATGGCCAGAACCCATCTATGGGGGTTGTTGGAAATGGACCTCAATTTCCTTATGGTTCTAATCCATACCAGGCCAGCCATATGACAGGTTCACCTGGTATGGTTGTTGCATCACCTGGGACCATTCAATCCACTGGTCAACCACCTTCAACTCAGCTAGGACAACATCAACTTGCTTATCAGCACATGCATCAGCAACAACAGCAGCAGCTGCGGCAACGTCTCCAAGCCTTCTGGGCAAACCAATATCAAGAAATCGAGAAGGTGACCGATTTCAAGAACCATAGCCTCCCCTTGGCGAGGATCAAGAAGATTATGAAGGCTGACGAGGATGTCAGAATGATATCGGCTGAGGCACCGGTCATATTTGCGAGGGCATGTGAAATGTTCATATTGGAGTTAACCTTGCGCTCTTGGAATCACACAGAAGAGAACAAAAGGAGAACACTTCAAAAGAATGATATTGCAGCAGCCATCACAAGAACTGATATCTTTGATTTTTTGGTTGACATTGTGCCTAGGGAGGACTTGAAAGATGAAGTGCTTGCTTCAATGCCAAGAGGAGATGTGCCTGTTACAGGGCCTCCTGAGGCACTTCCTTATTGCTATATGCCACCTCAACAAGTTGGAGCTGCTGGTGTCATGATGGGTAATAAGCCTGTGATGGACCCATATGCTCAACAGACTCATCCCTACAACATGGCACCACAACTGTGGCCACAACCACCACCACCACCAGAGCAGCAACAATCATCTCCAGATCAGTAG | 795 | 0.4767 | MDHQGHGHGHGQNPSMGVVGNGPQFPYGSNPYQASHMTGSPGMVVASPGTIQSTGQPPSTQLGQHQLAYQHMHQQQQQQLRQRLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASMPRGDVPVTGPPEALPYCYMPPQQVGAAGVMMGNKPVMDPYAQQTHPYNMAPQLWPQPPPPPEQQQSSPDQ | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma10g01534 | 264 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 7 | 264 | - | - | |
Gma10g01534 | 264 | MobiDBLite | consensus disorder prediction | 45 | 63 | - | - | |
Gma10g01534 | 264 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Gma10g01534 | 264 | MobiDBLite | consensus disorder prediction | 235 | 264 | - | - | |
Gma10g01534 | 264 | Pfam | Core histone H2A/H2B/H3/H4 | 58 | 168 | IPR007125 | GO:0003677 | |
Gma10g01534 | 264 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 | 7 | 264 | - | - | |
Gma10g01534 | 264 | MobiDBLite | consensus disorder prediction | 245 | 264 | - | - | |
Gma10g01534 | 264 | Gene3D | Histone, subunit A | 67 | 183 | IPR009072 | GO:0046982 | |
Gma10g01534 | 264 | SUPERFAMILY | Histone-fold | 68 | 177 | IPR009072 | GO:0046982 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma10g01534 | Gma-Chr10 | 42425705 | 42426499 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma10g01534 | 1 | 227 | CCAAT-HAP5 Transcription Factor Family | AT1G08970 | 60.000 | 1.33e-80 | 240 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Gma10g01534 | Histone | 3.4e-18 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma10g01534 | K08066 | - | gmx:100776494 | 461.07 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g01534 | 10 | 42425705 | 42426499 | Gma20g02174 | 20 | 48900555 | 48901226 | ECH | |
Gma10g01534 | 10 | 42425705 | 42426499 | Gma10g01534 | 10 | 42425705 | 42426499 | ECH | |
Gma10g01534 | 10 | 42425705 | 42426499 | Gma20g02174 | 20 | 48900555 | 48901226 | GST | |
Gma19g02238 | 19 | 51100240 | 51102830 | Gma10g01534 | 10 | 42425705 | 42426499 | PCT | |
Gma03g02201 | 03 | 47391684 | 47392511 | Gma10g01534 | 10 | 42425705 | 42426499 | PCT | |
Gma10g01534 | 10 | 42425705 | 42426499 | Gma19g02238 | 19 | 51100240 | 51102830 | PCT | |
Gma10g01534 | 10 | 42425705 | 42426499 | Gma03g02201 | 03 | 47391684 | 47392511 | PCT |